TABLE 1.
Virus | S protein | E protein | M protein | N protein | Accessory or other proteins | No. of features (total n = 934) |
---|---|---|---|---|---|---|
SARS-CoV-2 | RBDb, Sc from BEI, S1, S2 and 30-, 50-, and 100-aa fragments by IVTT at ADI | Protein and 30- and 50-aa fragments by IVTT at ADI | Protein and 30-, 50-, and 100-aa fragments by IVTT at ADI | Protein and 30-, 50-, and 100-aa fragments by IVTT at ADI | ORF 3a, 6, 7a, 8, and 10 protein and 30-, 50-, and 100-aa fragments by IVTT at ADI | 12 proteins, 310 fragments = 322 features |
SARS-CoV | Proteind and peptide set from BEI Resources | IVTT by ADI, peptides from BEI Resources | Protein, peptides from BEI Resources | Protein, peptides from BEI | 3CL protease from BEI Resources | 5 proteins, 265 peptides = 270 features |
MERS-CoV | Protein from BEI Resources | Protein produced by IVTT at ADI | Protein produced by IVTT at ADI | BEI Resources | ORF 3a, 4a, 4b, 5, and 8b proteins produced by IVTT at ADI | 9 proteins |
HCoV-NL63 | Protein by IVTT at ADI, peptides from BEI | Protein produced by IVTT at ADI | Protein produced by IVTT at ADI | Protein produced by IVTT at ADI | ORF 3 protein produced by IVTT at ADI | 5 proteins and 96 peptides = 101 features |
HCoV-OC43 | Protein by IVTT at ADI, peptides from BEI | Protein produced by IVTT at ADI | Protein produced by IVTT at ADI | Protein produced by IVTT at ADI | HE, N2 protein IVTT at ADI | 6 proteins and 226 peptides = 232 features |
IVTT means coupled in vitro transcription and translation.
RBD is the receptor binding domain, aa 319 to 541 of the SARS-CoV-2 S protein.
SARS-CoV-2 S protein is a stabilized form with a trimerization sequence and transmembrane domain deletion.
SARS-CoV-S protein is a transmembrane domain deleted form.