TABLE 2.
Haplotype US28-1 is common in HCMV from Australian samplesa
| Toledo | A | D | E | T | F | N | L | R | F | R | V | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Variant | T | E | L | A | L | D | I | K | V | Q | A | Indob | Ausc | P valued |
| Position | 8 | 15 | 18 | 21 | 25 | 170 | 192 | 267 | 314 | 329 | 346 | (n = 28) | (n = 28) | |
| US28-1 | A | D | E | T | F | D | L | R | F | R | V | 1 | 12 | 0.0009 |
| US28-2 | A | D | E | T | F | N | L | R | F | R | V | 4 | 10 | 0.12 |
| US28-3 | A | D | E | T | F | D | L | R | F | Q | V | 5 | 0 | 0.05 |
| US28-4 | A | D | E | T | F | D | L | R | F | R | A | 8 | 3 | 0.18 |
| US28-5 | A | D | E | A | L | N | L | R | F | R | A | 3 | 3 | 0.99 |
| US28-6 | A | D | E | A | L | N | L | R | F | R | V | 1 | 4 | 0.35 |
| US28-7 | A | D | E | T | F | D | L | R | F | Q | A | 4 | 0 | 0.11 |
| US28-8 | A | D | E | T | F | N | L | K | V | R | A | 2 | 2 | 0.99 |
| US28-9 | A | D | E | A | L | N | L | R | F | Q | V | 2 | 0 | 0.49 |
| US28-10 | A | D | E | T | F | N | L | R | F | Q | V | 2 | 0 | 0.49 |
| US28-11 | T | E | L | T | F | D | L | R | F | R | V | 3 | 1 | 0.61 |
| US28-12 | A | D | E | T | F | D | L | K | V | R | A | 1 | 0 | 0.99 |
| US28-13 | A | D | E | A | L | D | L | K | V | R | A | 0 | 3 | 0.24 |
| US28-14 | A | D | E | T | F | N | L | R | F | R | A | 0 | 1 | 0.99 |
| US28-15 | A | D | E | T | F | N | L | K | F | R | A | 0 | 1 | 0.99 |
| US28-16 | A | D | E | T | L | N | L | K | F | R | A | 1 | 0 | 0.99 |
| US28-17 | T | E | L | T | F | D | L | R | F | Q | V | 2 | 0 | 0.49 |
| US28-18 | T | E | L | T | F | N | L | R | F | Q | V | 1 | 0 | 0.99 |
| US28-19 | A | E | L | T | F | D | L | R | V | R | V | 0 | 3 | 0.34 |
| US28-20 | A | D | E | T | F | D | L | K | F | R | A | 1 | 1 | 0.99 |
a
Gray shading represents variation in comparison to Toledo reference.
b
Indo, Indonesian samples.
c
Aus, Australian samples.
d
Fisher’s exact test comparing Australian and Indonesian adult samples; bold indicates that statistical significance was reached.