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. 2021 Oct 27;9(2):e00020-21. doi: 10.1128/Spectrum.00020-21

TABLE 3.

Predicted change in binding energy relative to Toledo (ΔΔG, in kcal/mol) for interactions between clinical variants of US28 and chemokines or HIV gp120

Variant CX3CL1
ΔΔG
CCL2
ΔΔG
CCL3
ΔΔG
CCL4
ΔΔG
CCL5
ΔΔG
CCL13
ΔΔG
gp120
Indoa
ΔΔG
gp120
Ausb
ΔΔG
D15E −2.8 −4.3 +7.1 −2.6 −1.3 +4.0 +0.5 +1.3
E18L +7.4 +1.6 +9.7 +0.7 +1.9 −0.8 −4.6 −3.9
D15E, E18Lc +4.0 −1.4 +15.0 −3.5 −0.7 +3.2 −5.3 −3.7
A19D −1.2 −4.6 +0.2 +0.2 −6.6 −2.6 −1.0 −1.3
T21A +2.4 +1.8 +7.5 +2.2 +2.8 +1.9 −0.3 +0.1
F25L +1.6 +2.4 +1.5 +0.5 +0.4 −2.4 +7.1 +1.2
T21A, F25Lc +4.1 +4.3 +8.7 +2.3 +3.1 −0.6 +6.5 +1.5
Y40N +14.5 +9.0 +10.6 +17.4 +9.6 +2.2 +2.9 +9.7
G50C −0.0 −0.0 −0.0 +8.0 +0.8 −0.0 −0.0 +0.0
N170D −0.4 +4.5 +2.2 +2.1 −0.1 −4.4 −1.8 −2.4
R267K +0.9 +0.9 +0.5 +0.6 +0.2 +0.4 −0.3 +0.3
a

Indonesian HIV isolate.

b

Australian HIV isolate.

c

Double mutations tested as alleles were universally coinherited.