Table 2.
Expression pattern of 5 predicted target genes enriched in plant hormone signal transduction and peroxisome pathway.
| target gene IDa | miRNA IDb | The expression level of predicted target genesc | Descriptiond | |||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Ziyu44 | JNXN | |||||||||
| 0 h | 3 h | 10 h | 22 h | 0 h | 3 h | 10 h | 22 h | |||
| LOC_Os01g09450 | osa-miR2905 | 5 | 5 | 3 | 3 | 8 | 7 | 4 | 2 | IAA |
| LOC_Os04g43740 | osa-miR810b.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | SAUR |
| LOC_Os01g72020 | miR9664 | 12 | 12 | 22 | 18 | 12 | 10 | 18 | 16 | NPR1 |
| LOC_Os07g46990 | osa-miR398b | 150 | 175 | 301 | 337 | 167 | 154 | 231 | 366 | CSD |
| LOC_Os08g44770 | osa-miR528 | 20 | 25 | 20 | 22 | 17 | 13 | 12 | 12 | CSD |
LOC_Os01g09450, LOC_Os04g43740, and LOC_Os01g72020 were enriched in the plant hormone signal transduction pathway, LOC_Os07g46990 and LOC_Os08g44770 were enriched in the peroxisome pathway.
The corresponding miRNAs of predicted target genes are listed in this table.
Reads are normalized to library size and are presented in reads per million (RPM).
Description of the gene product. LOC_Os01g09450: OsIAA2–Auxin-responsive Aux/IAA gene family member, expressed; LOC_Os04g43740: OsSAUR18–Auxin-responsive SAUR gene family member, expressed; LOC_Os01g72020: BTBA3–Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Ankyrin repeat region, regulatory protein NPR1, expressed; LOC_Os07g46990: copper/zinc superoxide dismutase, putative, expressed; LOC_Os08g44770: copper/zinc superoxide dismutase, putative, expressed.