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. 2021 Jun 9;9(1):10.1128/spectrum.00003-21. doi: 10.1128/spectrum.00003-21

TABLE 2.

Gene expression analyzed by RT-qPCR in models treated with 100 ng/ml RANK + DAPT for 24 h

Genea Terminal ileum
Cecum
Colon
FCb P valuec FC P value FC P value
LRG5 1.1 NS 4.7 NS 0.4 <0.005
SPIB 213.9 <0.005 8.7 NS 14,625.1 <0.005
KLF4 0.7 NS 0.6 NS 0.8 NS
ESE1 0.9 NS 0.4 NS 0.7 <0.05
MUC2 2.6 NS 0.2 NS 1.2 NS
CGA 0.3 NS 0.5 NS 1.7 NS
NEUROD BDL BDL 1.2 NS
SPDEF 0.8 NS 0.4 NS 0.3 <0.005
SOX9 1.2 NS 0.3 NS 1.3 <0.05
LYZ 1.1 NS 0.2 NS 0.6 <0.005
OCLDN 1.2 NS 0.4 NS 1.1 NS
SIM 1.1 NS 0.2 NS 1.0 NS
a

Please refer to Materials and Methods for information on each gene.

b

Fold change (FC) reflects the fold change in gene expression in the 100 ng/ml RANKL + DAPT treatments relative to the DAPT treatment at 24 h. BDL, below detection level. Note that the SPIB expression levels correspond to the data presented in Fig. 2.

c

Statistical significance determined with the nonparametric Mann-Whitney test. NS, not significant.