TABLE 1.
Probe specificity
| Probe | SARS-CoV-2 genomes (%) (n = 11629) | Non-SARS-CoV-2 genomes (%) (n = 585) |
|---|---|---|
| Probe 1 Bitscore (Max 40) | ||
| 40 | 98.72 | 0.00 |
| 32–38 | 1.24 | 0.00 |
| 22–30 | 0.03 | 0.00 |
| 20 | 0.00 | 56.41 |
| 18 | 0.00 | 34.53 |
| <18 | 0.01 | 9.06 |
| Probe 2 Bitscore (Max 48) | ||
| 48 | 99.66 | 0.00 |
| 34–46 | 0.34 | 0.00 |
| 32 | 0.00 | 8.89 |
| 24–30 | 0.00 | 0.34 |
| 22 | 0.00 | 5.81 |
| 20 | 0.00 | 53.50 |
| 18 | 0.00 | 31.45 |
| <18 | 0.00 | 0.00 |