TABLE 3.
Discrepant samples for monomicrobial samples
| Sample ID | SOC resulta | ePlex BCID panel resulta | WGS BLAST/WGS KMER resulta,b |
|---|---|---|---|
| BCID-GP panel | |||
| BCID 8 | VGS | Streptococcus pneumoniae | Streptococcus mitis |
| BCID 30 | VGS | ND | Streptococcus salivarius |
| BCID 35 | VGS | Streptococcus pneumoniae | Streptococcus mitis |
| BCID 57 | CoNS | Staphylococcus epidermidis | Staphylococcus hominis |
| BCID 69 | CoNS | Staphylococcus epidermidis | Staphylococcus pasteuri |
| BCID 50 | Rothia dentocariosa | ND | Rothia mucilaginosa b |
| BCID-GN panel | |||
| BCID 12 | Escherichia coli | ND | Escherichia coli |
| BCID 31 | Klebsiella oxytoca | Klebsiella oxytoca; Enterobacter cloacae complex | NP |
| BCID 43 | Klebsiella pneumoniae | Klebsiella pneumoniae; Escherichia coli | NP |
| BCID 24 | Pantoea agglomerans | ND | Pantoea vagans b |
| BCID 28 | Rhizobium radiobacter | ND | Rhizobium sp.b |
| BCID 70 | Rahnella aquatilis | ND | Rahnella aquatilis b |
| BCID 83 | Pantoea sp. | ND | Pantoea vagans b |
| BCID 98 | Pseudomonas putida | ND | Pseudomonas monteilii b |
| BCID 104 | Pseudomonas oryzihabitans | ND | Pseudomonas oryzihabitans b |
a
SOC, standard of care; BCID, blood culture identification; WGS, whole-genome sequencing; VGS, viridans group streptococci; CoNS, coagulase-negative Staphylococcus spp.; ND, not detected; NP, not performed.
b
Organism was not an on-panel organism.