TABLE 4.
Polymicrobial samples
| Sample id | SOC resulta | ePlex BCID panel resulta | WGS BLAST/WGS KMER resulta |
|---|---|---|---|
| BCID-GP Panel | |||
| BCID 4 | Staphylococcus haemolyticus; Candida guilliermondii | Staphylococcus | NP |
| BCID 19 | Staphylococcus haemolyticus; VGS | Staphylococcus epidermidis; Streptococcus pneumoniae | Staphylococcus haemolyticus; Streptococcus mitis |
| BCID 32 | Enterococcus faecium; VGS | Enterococcus faecium | NP for Enterococcus; Streptococcus mitis |
| BCID 68B | Staphylococcus epidermidis; Pseudomonas fluorescens | Staphylococcus epidermidis | NP |
| BCID 94 | Staphylococcus epidermidis; VGS | Staphylococcus epidermidis; Streptococcus | NP |
| BCID 96A | VGS; Acinetobacter baumannii group | ND | Streptococcus mitis |
| CID 99 | Staphylococcus epidermidis; VGS | Staphylococcus epidermidis; Streptococcus | NP |
| BCID-GN panel | |||
| BCID 68A | Pseudomonas fluorescens; Staphylococcus epidermidis | ND | Pseudomonas fluorescens b |
| BCID 93 | Enterobacter cloacae complex; Acinetobacter baumannii complex | Enterobacter cloacae complex | Enterobacter cloacae complex not sequenced; Acinetobacter nosocomialisb |
| BCID 112 | Stenotrophomonas maltophilia; Pseudomonas putida | Stenotrophomonas maltophilia | S. maltophilia not sequenced; Pseudomonas putidab |
| BCID 116 | Klebsiella pneumoniae; Enterobacter cloacae complex | Klebsiella pneumoniae; Enterobacter cloacae complex | NP |
a
SOC, standard of care; BCID, blood culture identification; WGS, whole-genome sequencing; VGS, viridans group streptococci; CoNS, coagulase-negative Staphylococcus spp.; ND, not detected; NP, not performed.
b
Organism was not an on-panel organism.