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. 2021 Jul 28;9(1):10.1128/spectrum.00075-21. doi: 10.1128/spectrum.00075-21

TABLE 2.

Sequences of oligonucleotide primers used in this study

Primer name Oligonucleotide sequence (5′–3′) (restriction enzyme)a
Psip1Ab1-L-F AACTGCAGCAGCTATAACATATGATGGA (PstI)
Psip1Ab1-L-R CGGGATCCAATTATCCCTCCATCATTC (BamHI)
Psip1Ab1-S-F AACTGCAGCATCCGTTAAAGGAAGCATGAATTAGTAATG (PstI)
Psip1Ab1-F-R CGGGATCCTTTAAAAGTGACCTTAAAAAAATCC (BamHI)
sip1Ab1-F AACTGCAGCAGCTATAACATATGATGGA (PstI)
sip1Ab1-R CGGGATCCTTAATTTCCACTTAAAATCTTTGTTTGAACAGG (BamHI)
304-F CTATGACCATGATTACGCCAAGCTTGC
304-S GGATGTGCTGCAAGGCGATTAAGTTGG
304-18Z F CGTAATCTTACGTCAGTAACTTCCACAGTA
304-18Z R CGCCAGGGTTTTCCCAGTCACGAC
abrB-a TATCGATGCATGCCATGGTACCCGGGCATATGCCTGTGGCGTAATAT
abrB-b CCTCAAATGGTTCGCTGTTTTAGATTCGTC ATTTTTCG
Km-F CGAAAAATGACGAATCTAAAACAGCGAACCATTTGAGG
Km-R GCTTATTTTG CTGTTTCGAT ATAAAATTCC TCGTAGGCGC
abrB-c GCGCCTACGA GGAATTTTAT ATCGAAACAG CAAAATAAGC
abrB-d TCGACGCGTC TGCAGAAGCT TCTAGAATTC TACGAGTTAT CATGAGCAC
AbrB-F CGGATCCGATTATGAAATCTACTGGTATTG (BamHI)
AbrB-R GCGTCGACTTTTGCTGTTTCGATATAATCT(SalI)
JDWΔAbrB-F GCCATGAGCAAAGACTTTCTTCGGA
JDWΔAbrB-R GGTAGAGTGCTCTGATGGAAGTTAT
sip1Ab15′race-R CTTTAAATATCCAGAATCTAGCTAAAAACCATCC
Psip1-S-F CATCCGTTAAAGGAAGCATGAATTA
Psip1-S-R AATTATCCCTCCATCATTCTTTTTG
Psip1-F-F CAGCTATAACATATGATGGAAGAGAAA
Psip1-F-R TTTAAAAGTGACCTTAAAAAAATCC
M13F-FAM GTAAAACGACGGCCAGT (5′ FAM labeled)
M13R-FAM CAGGAAACAGCTATGAC (5 FAM labeled)
a

FAM, 6-carboxyfluorescein. The restriction sites are underlined and bolded.