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. 2021 Oct 28;810:151283. doi: 10.1016/j.scitotenv.2021.151283

Table 2.

Standard curve summaries for RT-qPCR SARS-CoV-2 variant detection and the CDC N1 assay. PCR efficiency and y-intercept cycle threshold (Ct) values were calculated for each of the primer-probe sets against tenfold dilutions of the corresponding DNA oligonucleotides. N1 was tested with both the WT and B.1.1.7 oligonucleotides.

Sdel WT Sdel V SN501Y WT SN501Y V ND3L WT N1 (WT template) ND3L V N1 (V template)
Slope −3.43 −3.36 −3.56 −3.39 −3.47 −3.57 −3.28 −3.34
Intercept 38.60 37.88 39.70 38.76 38.26 36.65 37.48 35.75
RSQ 1.000 0.996 0.994 0.999 0.997 1.000 0.999 0.998
Efficiency 95.54 98.40 90.89 97.16 94.27 90.48 101.67 99.28