Table 3.

Common (putative) genes of the modules purple (S. lycopersicum) and blue (S. pennellii) among the top 40 highly significant up-regulated genes in all stresses harboring nitrogen deficiency

Species	Gene ID	(Putative) function	N-	N-eL	N-cold	N-eLcold
S. lycopersicum
	Solyc05g053550.3.1	Chalcone synthase	+	+	+	+
	Solyc10g052500.2.1	Isoflavone reductase homolog			+
	Solyc05g014710.4.1	Putative remorin	+	+	+	+
	Solyc04g082860.3.1	Putative UDP-glycosyltransferase		+		+
	Solyc10g085880.1.1	Putative UDP-glycosyltransferase		+		+
	Solyc04g074340.3.1	Putative UDP-glycosyltransferase			+
	Solyc01g098420.3.1	Unknown function	+	+	+	+
	Solyc02g031730.1.1	Unknown function	+	+	+	+
	Solyc04g016085.1.1	Unknown function	+	+	+	+
	Solyc06g068130.3.1	Unknown function	+	+	+	+
	Solyc07g008210.4.1	Unknown function	+	+	+	+
S. pennellii
	Sopen10g032910.1	Flavonol-3-O-rhamnosyltransferase				+
	Sopen03g025580.1	Mlo family	+	+	+	+
	Sopen11g003340.1	Putative UDP-glycosyltransferase	+	+	+	+
	Sopen03g021390.1	Putative UDP-glycosyltransferase	+
	Sopen06g025400.1	Unknown function	+	+	+	+
	Sopen07g004090.1	Unknown function	+	+	+	+
	Sopen08g006790.1	Unknown function	+	+	+	+
	Sopen11g007320.1	Unknown function	+	+	+	+
	Sopen11g017460.1	Unknown function	+	+	+	+

For each indicated stress the top 40 genes of the module purple (S. lycopersicum) and module blue (S. pennellii) were checked for their biological (putative) function