REAGENT or RESOURCE | SOURCE | IDENTIFIER |
---|---|---|
Antibodies | ||
anti-Yap(H-9) | Santa Cruz Biotechnology | Cat#sc-271134; RRID: AB_10612397 |
anti-Phospho-YAP (Ser127) | Cell Signaling Technology | Cat#13008; RRID: AB_2650553 |
anti-Sox9 (D8G8H) | Abcam | Cat#ab185966; RRID: AB_2728660 |
anti-Ki-67(D3B5) | Cell Signaling Technology | Cat#12075; RRID: AB_2728830 |
anti-Kim-1 | Abcam | Cat#ab47635; RRID: AB_882998 |
anti-α-SMA | BOSTER | Cat#BM0002; RRID: AB_2811044 |
anti-CD31 | BD Biosciences Pharmingen | Cat#550274; RRID: AB_393571 |
anti-Areg | Abcam | Cat#ab180722 |
anti-Survivin(D-8) | Santa Cruz | Cat#sc-17779; RRID: AB_628302 |
anti-Phospho-LATS1 (Thr1079) | Cell Signaling Technology | Cat#8654; RRID: AB_10971635 |
anti-COL IV | Abcam | Cat#ab19808; RRID: AB_445160 |
anti-β-tubulin | Proteintech Group | Cat#10068-1-AP; RRID: AB_2303998 |
Chemicals, peptides, and recombinant proteins | ||
PGE2 | Santa Cruz | Cat#sc-201225 |
Collagen I, Rat Tail | Corning | Cat#354236 |
4-hydrazinobenzoic acid | Molbase | Cat#SJ000FFC61940 |
Polyethylenimine | Polysciences, Inc | Cat#19850 |
EDC (1-ethyl-3-[3-dimethylaminopropyl]carbodiimide hydrochloride) | Thermo Scientific | Cat#22980 |
sulfo-NHS(N-hydroxysulfosuccinimide) | Thermo Scientific | Cat#24510 |
TRIzol reagent | Invitrogen | Cat#15596018 |
RIPA lysis buffer | Solarbio | Cat#R0010 |
Hieff® qPCR SYBR® Green Master Mix (No Rox) | Yeasen | Cat#11201ES08 |
FITC-labeled LTL | Vector Laboratories | Cat# FL-1321-2 |
DAPI | Beyotime Biotechnology | Cat#C1002 |
2-(N-morpholino) ethanesulfonic acid | Sangon Biotech | Cat#145224 |
Biological samples | ||
primary renal tubular epithelial cells | This Paper | N/A |
Transgenic mice for C57BL/6 Rosa26mTmG transgenic mice | Jackson Laboratory | Cat#007676 |
C57BL/6 Sox9-CreERT2 transgenic mice | Jackson Laboratory | Cat#018829 |
C57BL/6 mice | Laboratory Animal Center of the Academy of Military Medical Science | N/A |
Critical commercial assays | ||
PGE2 Enzyme Immunoassay Kit | ArborAssays | Cat#K051-H1 |
Urea Assay Kit | Nanjing Jiancheng Bioengineering Institute | Cat#C013-1 |
Creatinine Assay Kit | Nanjing Jiancheng Bioengineering Institute | Cat#C011-1 |
Cell Counting Kit-8 | Beyotime Biotechnology | Cat#C0038 |
Reverse transcriptase core kit | Takara | Cat#RR037A |
Hoechst Staining Kit | Beyotime Biotechnology | Cat#C0003 |
Oligonucleotides | ||
Bad 5′-AAGTCCGATCCCGGAATCC-3′ | This paper | N/A |
Bad 5′-GCTCACTCGGCTCAAACTCT-3′ | This paper | N/A |
Bax 5′-TGAAGACAGGGGCCTTTTTG-3′ | This paper | N/A |
Bax 5′-AATTCGCCGGAGACACTCG-3′ | This paper | N/A |
Caspase3 5′-TGGTGATGAAGGGGTC ATTTATG-3′ |
This paper | N/A |
Caspase3 5′-TTCGGCTTTCCAGTCAGA CTC-3′ |
This paper | N/A |
Fas 5′-TATCAAGGAGGCCCATTTTGC-3′ | This paper | N/A |
Fas 5′-TGTTTCCACTTCTAAACCATGCT-3′ | This paper | N/A |
Gapdh 5′-AGGTCGGTGTGAACGGATTTG-3′ | This paper | N/A |
Gapdh 5′-TGTAGACCATGTAGTTGAGG TCA-3′ |
This paper | N/A |
Nonspecific shRNA (sh Ctrl) 5′-CCGG-CA ACAAGATGAAGAGCACCAA-CTCGAG- TTGGTGCTCTTCATCTTGTTG-TTTTTG-3′ |
Sigma-Aldrich | Cat#SHC002 |
shRNA-Yap (sh Yap) 5′-CCGG-GCAGAC AGATTCCTTTGTTAA-CTCGAG-TTAAC AAAGGAATCTGTCTGC-TTTTTG-3′ |
Broad Institute | TRCN0000095864 |
Software and algorithms | ||
Two-photon microscope system | Olympus | FV1000 |
Scanning electron microscopy (SEM) | HITACHI | X-650 |
FT-IR spectromete | Bio-Rad | FTS-6000 |
Parallel-plate rheometer | New Castle | N/A |
Imaris | Oxinst | https://imaris.oxinst.com/ |
Prism 8 | GraphPad | https://www.graphpad.com/scientific-software/prism/ |
ImageJ | ImageJ | https://imagej.nih.gov/ij |