Table 5.
Effects of diet, time collection of sample and their interaction on the relative abundance of ruminal bacteria at genus level (% of the total) in ruminal fluid collected from Holstein calves fed a control diet (CTR) and a nitrate-containing diet (NIT).
| Item | Diet |
Time1 |
SEM |
P-value |
|||||
|---|---|---|---|---|---|---|---|---|---|
| CTR | NIT | 0 h | 4 h | 8 h | Diet | Time | D × T | ||
| Group of diminished bacteria by NIT diet | |||||||||
| Succiniclasticum | 1.90 | 0.59 | 1.19 | 1.16 | 1.39 | 0.069 | 0.004 | 0.354 | 0.132 |
| Coprococcus | 1.87 | 0.44 | 0.87 | 1.67 | 0.92 | 0.225 | 0.015 | 0.167 | 0.848 |
| Treponema | 1.31 | 0.66 | 1.10 | 0.89 | 0.97 | 0.315 | 0.033 | 0.062 | 0.585 |
| Shuttlewortia | 1.07 | 0.20 | 0.68 | 0.56 | 0.65 | 0.117 | 0.007 | 0.052 | 0.591 |
| Succinivibrio | 0.84 | 0.01 | 0.34 | 0.57 | 0.37 | 0.106 | 0.006 | 0.603 | 0.279 |
| Pseudobutyrivibrio | 0.58 | 0.04 | 0.41a | 0.16b | 0.36ab | 0.036 | 0.002 | 0.016 | 0.056 |
| Sharpea | 0.32 | 0.04 | 0.14 | 0.22 | 0.18 | 0.032 | 0.010 | 0.642 | 0.185 |
|
Selenomona |
0.22 |
0.10 |
0.13 |
0.13 |
0.21 |
0.023 |
0.024 |
0.270 |
0.271 |
| Group of increased bacteria by NIT diet | |||||||||
| Atopobium | 0.18 | 0.52 | 0.55a | 0.36ab | 0.13b | 0.052 | 0.023 | 0.015 | 0.008 |
| Erysipelotrichaceae_L7A_E11 | 0.08 | 0.21 | 0.20a | 0.10b | 0.13b | 0.011 | 0.010 | 0.005 | 0.010 |
|
Fibrobacter |
<0.01 |
0.08 |
0.04 |
0.02 |
0.06 |
0.009 |
0.003 |
0.240 |
0.192 |
| Group of bacteria unchanged by NIT diet | |||||||||
| Prevotella | 17.16 | 16.68 | 15.79 | 17.40 | 17.58 | 0.583 | 0.856 | 0.409 | 0.778 |
| Ruminococcus | 6.18 | 7.34 | 4.71b | 9.66a | 5.90b | 0.530 | 0.483 | 0.004 | 0.511 |
| Butyrivibrio | 3.55 | 4.59 | 5.08a | 3.42b | 3.72ab | 0.254 | 0.207 | 0.037 | 0.065 |
| Ruminococeae_Clostridium | 0.92 | 0.99 | 0.96b | 0.89b | 1.02a | 0.110 | 0.804 | 0.011 | 0.823 |
| Oscillospira | 0.79 | 0.80 | 0.74 | 0.80 | 0.84 | 0.093 | 0.971 | 0.920 | 0.828 |
| Bulleidia | 0.65 | 0.42 | 0.49 | 0.77 | 0.35 | 0.143 | 0.886 | 0.133 | 0.164 |
| Moryella | 0.13 | 0.19 | 0.19 | 0.12 | 0.18 | 0.018 | 0.132 | 0.277 | 0.572 |
| Streptococcus | 0.07 | 0.07 | 0.07 | 0.08 | 0.06 | 0.005 | 0.642 | 0.185 | 0.262 |
| Schwartia | 0.07 | 0.02 | 0.05 | 0.03 | 0.06 | 0.004 | 0.065 | 0.088 | 0.417 |
| Lactobacilus | 0.07 | 0.02 | 0.05 | 0.04 | 0.04 | 0.016 | 0.090 | 0.535 | 0.067 |
| Mogibacterium | 0.04 | 0.06 | 0.07a | 0.05ab | 0.03b | 0.005 | 0.256 | 0.020 | 0.184 |
D × T = Diet × Time interaction.
a, b Within a row, means with different superscripts differ at P ≤ 0.05.
10 h: pre-feeding period; 4 and 8 h: post-feeding periods.