Table 1.
Protein Name | PDB Code: Chain | UniProt Accession | ECOD H-Group Name | Fold Residues | Residues of the Common Corea |
---|---|---|---|---|---|
uL2 | 1VY4: BD | P60405 | Nucleic acid-binding proteins (2.1.1.378) | 73–120 | 74–85, 92–110, [111–119] |
uL2 | 1VY4: BD | P60405 | SH3 (4.1.1.447) | 126–197 | [136–143], 161–169, 172–189 |
uL24 | 1VY4: BY | Q5SHP9 | SH3 (4.1.1.786) | 1–107 | [7–16], 23–40, 64–71 |
uS12 | 1VY4: AL | Q5SHN3 | Nucleic acid-binding proteins (2.1.1.370) | 28–100 | 32–40, 54–69, [77–84] |
uS17 | 1VY4: AQ | P0DOY7 | Nucleic acid-binding proteins (2.1.1.51) | 2–78 | 6–24, 39–46, [51–59] |
bL19 | 1VY4: BT | P60490 | SH3 (4.1.1.57) | 1–131 | [22–31], 44–53, 59–78 |
bS1 | 6H4N: y | P0AG67 | Nucleic acid-binding proteins (2.1.1.570) | 276–348 | 280–307, [321–332] |
aL14 | 4V6U: B5 | Q8U2L5 | SH3 (4.1.1.776) | 3–61 | [4–12], 20–38, 44–50 |
aL21 | 4V6U: BR | Q8U217 | SH3 (4.1.1.59) | 31–97 | [35–44], 60–92 |
aS4 | 4V6U: AE | Q8U011 | Nucleic acid-binding proteins (2.1.1.45) | 121–179 | 122–150, [158–167] |
aS4 | 4V6U: AE | Q8U011 | SH3 (4.1.1.449) | 178–236 | [179–188], 194–204, 212–230 |
aS28 | 4V6U: AX | Q8U159 | Nucleic acid-binding proteins (2.1.1.20) | 1–71 | 6–17, 25–45, [49–58] |
bIF1 | 5LMV: W | Q5SHR1 | Nucleic acid-binding proteins (2.1.1.21) | 1–72 | 9–37, [48–57] |
EF-P | 1UEB: A | Q76G20 | SH3 (4.1.1.27) | 1–63 | [7–15], 17–26, 37–54 |
EF-P | 1UEB: A | Q76G20 | Nucleic acid-binding proteins (2.1.1.19) | 64–126 | 64–98, [103–115] |
EF-P | 1UEB: A | Q76G20 | Nucleic acid-binding proteins (2.1.1.22) | 127–184 | 127–136, 149–161, [165–173] |
aIF1 | 4MNO: A | Q9V138 | Nucleic acid-binding proteins (2.1.1.20) | 25–90 | 25–54, [63–72] |
aIF2A | 1YZ6: A | Q9V0E4 | Nucleic acid-binding proteins (2.1.1.80) | 9–83 | 13–45, [57–66] |
aIF5A | 1IZ6: A | O50089 | e1iz6A2 (4.1.1.111) | 2–70 | 11–20, 23–32, [43–59] |
aIF5A | 1IZ6: A | O50089 | Nucleic acid-binding proteins (2.1.1.21) | 71–135 | 73–104, [113–122] |
The residues of the Lβ element are given in brackets.