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. 2021 Sep 15;9(2):e00498-21. doi: 10.1128/Spectrum.00498-21

TABLE 4.

Summary of Adonis comparisons based on E. coli expression using the Bray-Curtis distance metrica

Dataset Variable Dfb SumsOfSqsb MeanSqsb F.Modelb R2 Pr(>F)b
Full TP 2 0.277480486 0.138740243 2.51984881 0.114435337 0.001
Full TP:genotype 6 0.319590966 0.053265161 0.946338246 0.13180206 0.61
Full Genotype 3 0.14416488 0.04805496 0.800700071 0.059454835 0.88
No_N2 Genotype 2 0.112309675 0.056154837 0.920731037 0.057832208 0.595
No_eat-2 Genotype 2 0.093520559 0.04676028 0.810190806 0.0529184 0.814
No_daf-2 Genotype 2 0.09112913 0.045564565 0.77504047 0.052456064 0.845
No_asm-3 Genotype 2 0.086198993 0.043099496 0.687633722 0.048467118 0.949
a

All samples were included in the “full” data set comparisons, while samples indicated were omitted from the “no-” comparisons.

b

Df, degrees of freedom; SumsOfSqs, sums of squares; MeanSqs, mean of squares; F.Model, pseudo-F statistic from model; Pr(>), probability of observing a larger pseudo-F statistic by chance.