TABLE 4.
Summary of Adonis comparisons based on E. coli expression using the Bray-Curtis distance metrica
| Dataset | Variable | Dfb | SumsOfSqsb | MeanSqsb | F.Modelb | R2 | Pr(>F)b |
|---|---|---|---|---|---|---|---|
| Full | TP | 2 | 0.277480486 | 0.138740243 | 2.51984881 | 0.114435337 | 0.001 |
| Full | TP:genotype | 6 | 0.319590966 | 0.053265161 | 0.946338246 | 0.13180206 | 0.61 |
| Full | Genotype | 3 | 0.14416488 | 0.04805496 | 0.800700071 | 0.059454835 | 0.88 |
| No_N2 | Genotype | 2 | 0.112309675 | 0.056154837 | 0.920731037 | 0.057832208 | 0.595 |
| No_eat-2 | Genotype | 2 | 0.093520559 | 0.04676028 | 0.810190806 | 0.0529184 | 0.814 |
| No_daf-2 | Genotype | 2 | 0.09112913 | 0.045564565 | 0.77504047 | 0.052456064 | 0.845 |
| No_asm-3 | Genotype | 2 | 0.086198993 | 0.043099496 | 0.687633722 | 0.048467118 | 0.949 |
All samples were included in the “full” data set comparisons, while samples indicated were omitted from the “no-” comparisons.
Df, degrees of freedom; SumsOfSqs, sums of squares; MeanSqs, mean of squares; F.Model, pseudo-F statistic from model; Pr(>), probability of observing a larger pseudo-F statistic by chance.