Table 3.
Relevant upregulated (2-fold or higher; FDR< 0.05) transcripts after BP178 treatment (125 μM), identified in this study, associated with plant-defense response (GO term GO:0006952).
| Family/superfamily | Gene accession No. | BP178 vs NTC (FC) | Property/ GO molecular function | GO biological process |
|---|---|---|---|---|
| Blue copper protein, Plastocyanin-like | Solyc03g116690 Solyc03g116700 |
2.41; 3.64 | Copper ion binding, electron transfer activity | Redox reactions occurring during primary defense responses. |
| Homeobox-like domain | Solyc02g087960 Solyc04g005800 |
2.33; 2.17 | DNA-binding transcription factor activity | Responses to biotic and abiotic stresses. |
| AP2/ERF transcription factor | Solyc09g089930 Solyc04g078640 Solyc12g056980 XM004244583 |
3.38; 2.46; 2.34; 2.82 | Transcription regulatory region DNA binding | Defense response. Ethylene and JA signaling pathways. |
| NAC transcription factor | Solyc05g007770 | 2.82 | Transcription regulatory region DNA binding | Response to stress, cold and drought stress and methyl methanesulfonate (MMS) treatment. |
| Mitochondrial peptide methionine sulfoxide reductase | Solyc02g063250 | 2.54 | Oxidoreductase | Response to oxidative stress. |
| Lipoxygenase | Solyc08g029000 | 14.04 | Lipoxygenase | Pest resistance and senescence. Responses to wounding. Involved in hypersensitive response. |
| Peptidase C1 | Solyc02g077040 | 2.66 | Cysteine-type endopeptidase | Hypersensitive response. Defense response to fungus, UV-B and to copper ion. |
| Cytochrome P450 | Solyc09g066400 Solyc11g069800 Solyc04g078290 |
5.18; 2.09; 2.89 | Oxidoreductase activity | Induction by ethylene. Involved in the biosynthesis of hormones and defensive compounds. |
| Ser/Thr protein kinase | Solyc10g045610 Solyc09g061410 Solyc12g005720 |
2.33; 2.15; 6.40 | Receptor serine/threonine kinase binding | Signaling during pathogen recognition. Activation of plant defense responses. |
| Harpin-induced 1 | Solyc02g036480 | 3.18 | Role in plant immunity | Defense response to bacterium, virus, SA, wounding and hypoxia. |
| WRKY group III | Solyc08g082110 | 2.12 | Transcription regulatory region DNA binding | Defense response to bacterium, chitin, water deprivation and SA. Regulation of JA mediated signaling pathway. |
| Acetyltransferase | Solyc02g064690 Solyc00g272810 Solyc08g068730 |
2.15; 2.56; 4.26 | N-acetyltransferase activity | Response to ethylene and JA. Induced in response to pathogen infection, wounding, or elicitor treatments. |
| Bulb-type lectin domain | Solyc07g062490 | 5.38 | Carbohydrate binding | Up-regulated by fungal elicitor, heat and cellular response to hypoxia. |
| Major facilitator superfamily (MFS) transporter | Solyc01g096720 | 3.70 | Potassium ion antiporter activity | Response to water deprivation. |
| Peptidase A1 | Solyc08g068870 | 3.00 | Aspartic-type endopeptidase | Up-regulated locally and systematically during systemic acquired resistance (SAR) and locally by SA. Acts downstream of SA to suppress systemic immunity. |
| Isoprenoid synthase domain | Solyc03g006550 | 4.53 | Terpene synthase activity/(E,E)-geranyllinalool synthase activity | Response to bacterium, herbivore, JA, wounding, singlet oxygen. |
| PR STH-2-like, BetVI | Solyc09g090980 | 5.56 | Protein phosphatase inhibitor/signaling receptor activity | Response to biotic stimulus. |
| PR1 | Solyc00g174330 Solyc01g106620 |
2.56; 2.84 | Antimicrobial, fungicide | Defense response to fungus, response to biotic stimulus. |
| PR2 | XM004228957 | 3.18 | β-1,3-Glucanase | Defense of plants against pathogens. |
| PR3 | Solyc02g082920 Solyc05g050130 Solyc02g061770 XR183217 |
3.13; 2.82; 7.36; 2.02 | Endochitinase (acidic endochitinase, also lysozyme activity) | Response to bacterium and wounding, defense response to fungus, cold, water deprivation, wounding and to salt stress. |
| PR4 | Solyc01g097270 Solyc04g072000 |
2.35, 5.32 | Barwin domain chitinase I/II | Defense response to fungus and bacterium. |
| PR5 | Solyc08g080660 Solyc08g080640 |
4.31; 4.08 | Thaumatin like-proteins | Response to infection by a pathogen and possess antifungal activity. Induced by osmotic stress. |
| PR6 | Solyc03g098740 Solyc08g080630 Solyc06g034370 |
2.43; 3.63; 3.87 | Endopeptidase inhibitor | Response to wounding, herbivore, insects. |
| PR7, Peptidase S8 (subtilisin-like) | Solyc08g079870 XM004249457 Solyc08g079900 |
3.71; 2.63; 4.77 | Serine-type endopeptidase | Pathogen recognition and immune priming. |
| PR9 | Solyc07g056480 Solyc04g071890 Solyc09g011630 |
2.61; 2.50; 2.40 | Peroxidase | Response to environmental stresses such as wounding, pathogen attack and oxidative stress. |
| PR10 | Solyc05g007950 | 6.36 | Ribonuclease like-proteins | Innate immune response. Essential role in Innate immune response by recognizing and degrading RNAs from microbial pathogens. |
| PR14 | Solyc06g084190 Solyc08g007460 Solyc08g067550 |
2.23; 7.18; 3.88 | Lipid-transfer protein | Components of the plant innate immune system. Responses to biotic and abiotic stresses and fungus. |
FC, fold-change value; SA, salicylic acid; JA, jasmonic acid.