TABLE 2.

An overview of the features of fIDBAC compared to the TYGS web server.

	TYGS	fIDBAC
Input	assembly (.fasta)	assembly (.fasta)
Primary search method	16S	k-mer and 16S
ORGI calculation method	dDDH	ANI
Species cutoff	70%	95%
Automatic MLST typing	NO	YES
AMR/VF gene prediction	NO	YES
Limits for user	publicly available	publicly available
Source code for local implement	NO	YES
Time consumed per assembly	about 60–80 min	about 5 min
Additional tools for genome evaluation and phylogenetic tree construction with custom genome	NO	YES