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. 2021 Nov;31(11):2107–2119. doi: 10.1101/gr.273631.120

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© 2021 Liu et al.; Published by Cold Spring Harbor Laboratory Press

This article is distributed exclusively by Cold Spring Harbor Laboratory Press for the first six months after the full-issue publication date (see https://genome.cshlp.org/site/misc/terms.xhtml). After six months, it is available under a Creative Commons License (Attribution-NonCommercial 4.0 International), as described at http://creativecommons.org/licenses/by-nc/4.0/.

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Figure 4. — True genealogy and posterior distribution along the sequence. The upper panel shows posterior probability of each genealogy at each site. The lower panel shows the true genealogy of each site. Coloring corresponds to different genealogies: Genealogy HC1 is in red, HC2 is in dark red, HG is in blue, and CG is in green.