Table 3.
Gene Set Name | Size | ES | NES | FDR q val. | |
---|---|---|---|---|---|
HI: pre vs. post | HALLMARK_IL6_JAK_STAT3_SIGNALING | 63 | 0.44 | 1.97 | 0.001 |
HALLMARK_TNFA_SIGNALING_VIA_NFKB | 158 | 0.33 | 1.72 | 0.014 | |
HALLMARK_HEME_METABOLISM | 153 | 0.30 | 1.57 | 0.035 | |
HALLMARK_INFLAMMATORY_RESPONSE | 134 | 0.28 | 1.44 | 0.075 | |
HALLMARK_ALLOGRAFT_REJECTION | 140 | 0.27 | 1.41 | 0.074 | |
HALLMARK_OXIDATIVE_PHOSPHORYLATION | 180 | −0.51 | −2.27 | 0.000 | |
HALLMARK_MYC_TARGETS_V1 | 190 | −0.46 | −2.04 | 0.000 | |
HALLMARK_FATTY_ACID_METABOLISM | 132 | −0.42 | −1.78 | 0.011 | |
HALLMARK_ADIPOGENESIS | 184 | −0.38 | −1.69 | 0.056 | |
HALLMARK_PEROXISOME | 81 | −0.43 | −1.69 | 0.057 | |
HALLMARK_CHOLESTEROL_HOMEOSTASIS | 62 | −0.44 | −1.69 | 0.059 | |
HALLMARK_MYC_TARGETS_V2 | 50 | −0.45 | −1.64 | 0.102 | |
HALLMARK_MTORC1_SIGNALING | 185 | −0.36 | −1.61 | 0.144 | |
MI: pre vs. post | HALLMARK_IL6_JAK_STAT3_SIGNALING | 63 | 0.47 | 2.07 | 0.000 |
HALLMARK_ALLOGRAFT_REJECTION | 140 | 0.37 | 1.81 | 0.005 | |
HALLMARK_INTERFERON_GAMMA_RESPONSE | 173 | 0.34 | 1.75 | 0.006 | |
HALLMARK_INTERFERON_ALPHA_RESPONSE | 89 | 0.38 | 1.73 | 0.005 | |
HALLMARK_INFLAMMATORY_RESPONSE | 134 | 0.34 | 1.66 | 0.011 | |
HALLMARK_COMPLEMENT | 154 | 0.31 | 1.56 | 0.020 | |
HALLMARK_KRAS_SIGNALING_DN | 63 | 0.35 | 1.53 | 0.022 | |
HALLMARK_TNFA_SIGNALING_VIA_NFKB | 158 | 0.26 | 1.30 | 0.130 | |
HALLMARK_ESTROGEN_RESPONSE_EARLY | 141 | 0.26 | 1.28 | 0.129 | |
HALLMARK_MYC_TARGETS_V2 | 50 | 0.30 | 1.22 | 0.194 | |
HALLMARK_OXIDATIVE_PHOSPHORYLATION | 180 | −0.39 | −1.76 | 0.022 | |
HALLMARK_EPITHELIAL_MESENCHYMAL_TRANSITION | 163 | −0.35 | −1.55 | 0.120 | |
HALLMARK_WNT_BETA_CATENIN_SIGNALING | 36 | −0.44 | −1.49 | 0.151 | |
HALLMARK_PEROXISOME | 81 | −0.37 | −1.46 | 0.160 | |
HALLMARK_ADIPOGENESIS | 184 | −0.31 | −1.38 | 0.247 |
Only pathways with FDR q val. < 0.25 are shown. Size represents the number of genes in the listed gene set. A negative normalized enrichment score (NES) represents enrichment in the precondition. ES, enrichment score; FDR q val., false-discovery rate-adjusted significance score; NES, normalized enrichment score. n = 12 subjects/group (HI: 7 F, 4 M; MI: 9 F, 3 M).