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. 2021 Jun 24;30(22):2190–2204. doi: 10.1093/hmg/ddab166

Table 1.

Summary of association results for all loci that passed replication criteria

Stratum dbSNPID CHR POS (GRCh38) Nearest gene EAF Other allele Stage EAF Beta SE P N
WHRadjBMI
 AAb-combined rs13301996 9 120 570 806 CDK5RAP2 T G SOL 0.8080 0.0050 0.0010 5.69E-07 12 672
Replication 0.8720 0.0036 0.0014 1.10E-02 12 496
SOL + replication 0.8295 0.0045 0.0008 2.88E-08 25 168
 HLc−women rs79478137 11 2 891 739 SLC22A18AS T C SOL 0.0150 -0.0230 0.0040 2.03E-07 7472
Replication 0.0169 -0.0116 0.0054 3.12E-02 6582
SOL + replication 0.0157 -0.0189 0.0032 3.64E-09 14 054
WCadjBMI
 EURd-combined rs3168072 11 61 864 038 FADS2 A T SOL 0.7250 0.5140 0.1020 5.28E-07 12 674
Replication 0.9750 2.0132 0.6323 1.45E-03 8845
SOL + replication 0.7313 0.5520 0.1007 4.21E-08 21 519
HIPadjBMI
 EURd-women rs28692724e 14 77 027 445 IRF2BPL T C SOL 0.4250 0.0020 0.0004 7.32E-07 7462
Replication 0.303 0.789 0.305 9.62E-03 4678
SOL + replication 0.3781 5.4900a 4.02E-08 12 140

EAF, estimated allele frequency; CHR, chromosome; pos, position; SE, standard error. Genome-wide significant (P<5×10−8) values are highlighted in bold.

aFor rs28692724, SOL analyses were performed on log10-transformed HIP, while replication analyses in European descent population used untransformed hip measurements. In the SOL + replication analyses, an z-score is provided instead of a beta.

bAA replication samples included: ARIC Study, Multi-Ethnic Study of Atherosclerosis (MESA) Study, Women’s Health Initiative (WHI) Study.

cHispanic Latino (HL) replication samples included: Genetics of Latinos Diabetic Retinopathy (GOLDR), HCHS/SOL, Mexican–American Hypertension Study (HTN), MACAD, MESA, Mexico-City, 1982 Pelotas Birth Cohort (PELOTAS), Starr County Health Studies (STARR), WHI.

dEuropean American (EA) replication samples included: ARIC.

ers28692724 is <500 Kb from a previously reported SNP nominally associated with WHRadjBMI (PMID: 28552196).