Table 1.
Stratum | dbSNPID | CHR | POS (GRCh38) | Nearest gene | EAF | Other allele | Stage | EAF | Beta | SE | P | N |
---|---|---|---|---|---|---|---|---|---|---|---|---|
WHRadjBMI | ||||||||||||
AAb-combined | rs13301996 | 9 | 120 570 806 | CDK5RAP2 | T | G | SOL | 0.8080 | 0.0050 | 0.0010 | 5.69E-07 | 12 672 |
Replication | 0.8720 | 0.0036 | 0.0014 | 1.10E-02 | 12 496 | |||||||
SOL + replication | 0.8295 | 0.0045 | 0.0008 | 2.88E-08 | 25 168 | |||||||
HLc−women | rs79478137 | 11 | 2 891 739 | SLC22A18AS | T | C | SOL | 0.0150 | -0.0230 | 0.0040 | 2.03E-07 | 7472 |
Replication | 0.0169 | -0.0116 | 0.0054 | 3.12E-02 | 6582 | |||||||
SOL + replication | 0.0157 | -0.0189 | 0.0032 | 3.64E-09 | 14 054 | |||||||
WCadjBMI | ||||||||||||
EURd-combined | rs3168072 | 11 | 61 864 038 | FADS2 | A | T | SOL | 0.7250 | 0.5140 | 0.1020 | 5.28E-07 | 12 674 |
Replication | 0.9750 | 2.0132 | 0.6323 | 1.45E-03 | 8845 | |||||||
SOL + replication | 0.7313 | 0.5520 | 0.1007 | 4.21E-08 | 21 519 | |||||||
HIPadjBMI | ||||||||||||
EURd-women | rs28692724e | 14 | 77 027 445 | IRF2BPL | T | C | SOL | 0.4250 | 0.0020 | 0.0004 | 7.32E-07 | 7462 |
Replication | 0.303 | 0.789 | 0.305 | 9.62E-03 | 4678 | |||||||
SOL + replication | 0.3781 | 5.4900a | 4.02E-08 | 12 140 |
EAF, estimated allele frequency; CHR, chromosome; pos, position; SE, standard error. Genome-wide significant (P<5×10−8) values are highlighted in bold.
aFor rs28692724, SOL analyses were performed on log10-transformed HIP, while replication analyses in European descent population used untransformed hip measurements. In the SOL + replication analyses, an z-score is provided instead of a beta.
bAA replication samples included: ARIC Study, Multi-Ethnic Study of Atherosclerosis (MESA) Study, Women’s Health Initiative (WHI) Study.
cHispanic Latino (HL) replication samples included: Genetics of Latinos Diabetic Retinopathy (GOLDR), HCHS/SOL, Mexican–American Hypertension Study (HTN), MACAD, MESA, Mexico-City, 1982 Pelotas Birth Cohort (PELOTAS), Starr County Health Studies (STARR), WHI.
dEuropean American (EA) replication samples included: ARIC.
ers28692724 is <500 Kb from a previously reported SNP nominally associated with WHRadjBMI (PMID: 28552196).