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. Author manuscript; available in PMC: 2021 Nov 2.
Published in final edited form as: J Phys Chem B. 2018 Nov 7;122(49):11519–11534. doi: 10.1021/acs.jpcb.8b07405

Table 1:

DNA Constructs Used in This Study

graphic file with name nihms-1716680-t0011.jpg
a

The blue arrows indicate the position of the kinks in complex with IHF; the yellow- and green-highlighted thymines represent fluorescein- and TAMRA-attachment, respectively, to that base; the blue-highlighted P indicates attachment of Atto550 to the phosphate group; A-tract is shown in red and the consensus sequence in magenta; the position of the mutation in H’44A is indicated in purple; the position of 4-nt loop is H1_CTloop is indicated in brown.

b-e

Kd values are from bthis study, cref.59, d-estopped-flow measurements reported in dref.61 and eref.60