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. 2017 Mar 6;66(5):823–842. doi: 10.1093/sysbio/syw119

Figure 2.

Figure 2.

The nodeslider/Expand move (top to bottom) prunes off branch Inline graphic-Inline graphic on the species tree Inline graphic (including clade Inline graphic), generates a new age for node Inline graphic, with Inline graphic [Equation (6)], rescales the node ages inside clade Inline graphic by Inline graphic, and reattaches branch Inline graphic-Inline graphic back to the species tree at the ancestral branch Inline graphic at age Inline graphic (indicated by the arrow). Affected nodes in the gene tree (Inline graphic and Inline graphic, marked by Inline graphic) are pruned and regrafted, with node ages inside the clades scaled by Inline graphic. In the reverse Shrink step (from bottom to top), branch Inline graphic-Inline graphic in Inline graphic is pruned off and reattached to a descendent branch (Inline graphic) of the sibling node (Inline graphic), at the new age Inline graphic, generated from Equation (7). Numeral labels on the interior nodes in the gene trees are the population IDs.