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. 2021 Oct 20;11:765540. doi: 10.3389/fcimb.2021.765540

Table 1.

Whole Genome Sequencing analysis of the Lm isolates: for each strain serogroup, clonal complex, accession number, presence/absence of virulence genes, resistance determinants and intact pro-phage are reported.

Lm_2510 Lm_2541
Accession number JAHAUX000000000 JAHAUW000000000
Typing Serogroup IV b IV b
Clonal Complex (CC) CC1 CC4
Virulence genes LIPI-1 + +
LIPI-2
LIPI-3 + +
LIPI-4 +
Internalin genes inlA; inlB; inlC; inlE; inlF; inlH; inlJ; inlK inlA; inlB; inlC; inlE; inlF; inlH; inlJ;
agrA + +
agrC + +
ami
aut
bsh + +
cheA + +
cheY + +
cwhA + +
dltA + +
fbpA + +
fur + +
gtcA + +
hpt + +
lap + +
lapB + +
lgt + +
lisK + +
lisR + +
lntA + +
lpeA + +
lplA1 + +
lspA + +
oatA + +
oppA + +
pdgA + +
prsA2 + +
purQ + +
srtA + +
srtB + +
stp + +
svpA + +
tagB
vip + +
virR + +
virS + +
aut_IVb + +
comK + +
gltA + +
gltB + +
lmo1280 + +
lmo2470 + +
lmo2491 + +
mdrM + +
Resistance determinants Antimicrobial resistance genes fosX; lin; norB; sul; tetA_2; tetA_3; tetC fosX; lin; norB; sul; tetA_2; tetA_3; tetC
Multidrug Efflux pumps mdrl; lde; SugE mdrl; lde; SugE
Intact pro-phage PHAGE_Lister_LP_030_3 (NC_024384.1)