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. 2021 Oct 20;12:755801. doi: 10.3389/fmicb.2021.755801

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Copyright © 2021 Bekaert, Goffin, McMillan and Desbois.

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

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Distribution of protein-encoding essential genes in the pan-genome of V. anguillarum. Most essential protein-encoding genes (114/212, 53.8%) were found within the core genome of V. anguillarum, i.e., found in over 95% of the 105 genomes analysed, whilst 54/212 (25.5%) were in the accessory genome or detected uniquely in this isolate (44/212, 20.8%; in blue). Each essential gene was further characterised to be annotated, of or a transposase or a transposase (in orange). Most of the core genes were annotated (110/114, 96.5%) whilst most of the transposases were found uniquely in this isolate (31/44, 70.5%). Note that some core genes may have been incorrectly assigned to the accessory gene list due to available genomes being incomplete or of poor quality.