Table 3.
Essential genes encoding products predicted to be released from the cell or expressed at the cell surface.
| Gene ID† | Pan-genome | Shared | Annotation | Cell location |
|---|---|---|---|---|
| RS10405 | Core | 1 | rsxB—Electron transport complex subunit | Cell inner membrane |
| RS16490 | Core | 0 | cdsA—Phosphatidate cytidylyltransferase | Cell inner membrane |
| RS17415 | Core | 2* | rseC—SoxR reducing system protein | Cell inner membrane |
| RS00530 | Core | 1* | pspE—Thiosulfate sulfurtransferase | Periplasm |
| RS02940 | Unique | 0 | Putative excinuclease | Cell inner membrane |
| RS08840 | Accessory | 1* | bcrA—benzoyl-CoA reductase subunit A | Cell inner membrane |
| RS17130 | Core | 4 | murG ‡ | Cell inner membrane |
Seven essential genes of V. anguillarum NB10Sm contained a significant peptide-signal and secretory pathway signal (P-value <10-3), with predicted subcellular locations as reported for E. coli. The seven genes were classified according to the pan-genome (see Figure 4) and were investigated for conservation within the six Vibrio essential gene studies (“Shared” column; see Figure 5), including three genes found to be shared with the V. anguillarum essential gene study of Guanhua et al. (2018) (*).
GeneID: VANGNB10_RSxxxxx.
UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase.