Table 2.

RNA-sequencing results using mNGS from CSF samples.

	Sample Nº	Number of mapped viral reads	Mapped viral reads (%)	Genome covered	Average coverage depth
E6	138	127,810	1.2	99.30%	1273
	255	70,030	0.6	99.88%	697
	268	56,357	0.59	99.86%	560
	365	6524	0.14	99.31%	64
E11	484	1046	0.01	95,76%	10
	1059	240,901	2.76	99.40%	2383
	1106	366,776	3.13	99.70%	3624
E13	53	159,567	1.61	100%	1593
E30	265	68,949	0.35	98.91%	684
	519	54,571	0.33	99.30%	537
	520	628,623	4.39	99.60%	6214
	675	91,887	0.76	99.50%	909