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. Author manuscript; available in PMC: 2022 Oct 6.
Published in final edited form as: Neuron. 2021 Sep 27;109(19):3088–3103.e5. doi: 10.1016/j.neuron.2021.09.001

Figure 2. Atlas of molecularly defined cell types in human AMY.

Figure 2.

(A) tSNE plot of 14,039 nuclei across 19 clusters, including 3 clusters of excitatory neurons and 8 clusters of GABAergic inhibitory neurons.

(B) Expression violin plots for the top genes for each of the neuronal classes (log2-normalized counts).

(C) Heatmap of Pearson correlation values evaluating the relationship between our human-derived AMY cell classes (rows) versus the cell populations reported in Chen et al. (2019), derived from mouse medial amygdala (MeA). Correlation was performed on the combined top 100 markers/cell populations in which annotated homology exists (here, 480 genes; see STAR Methods).