Table 1. Sources of mRNA and nascent RNA-seq data for Capan-1 and 2 cells, U2OS, RPE1, HeLa and HT1080 cells.
| Cell
line |
RNA | GSE Series | SRA Number |
|---|---|---|---|
| Mature mRNA | |||
| Capan-1 | mRNA | GSE79669 | SRR3308945 |
| Capan-2 | mRNA | GSE79669 | SRR3308945 |
| U-2OS | mRNA | GSE162163 | SRR13142368 |
| RPE1 | mRNA | GSE98541 | SRR5508027 |
| HeLa | mRNA | GSE90235 | SRR5048095 |
| HT1080 | mRNA | GSE78653 | SRR3192620 |
| Nascent RNA | |||
| U-2OS | 4SU-seq (4-thiouridine) | GSE162264 | SRR13159400 |
| RPE1 | EU-seq (5-ethynyl uridine) | GSE137448 | SRR10119526 |
| HeLa | 4SU-seq (4-thiouridine) | GSE128753 | SRR8775198 |