TABLE 4.
Species | % of sequence similaritya for:
|
|||||
---|---|---|---|---|---|---|
A. adiacens | A. defectiva | E. avium | E. faecalis | E. faecium | E. gallinarum | |
A. adiacens | 85 | 89 | 89 | 89 | 87 | |
A. defectiva | 89.8 | 87 | 85 | 86 | 85 | |
E. avium | 92.7 | 97.1 | 91 | 90 | 90 | |
E. faecalis | 92.7 | 91.3 | 92.7 | 89 | 90 | |
E. faecium | 95.7 | 89.8 | 91.3 | 91.3 | 90 | |
E. gallinarum | 94.2 | 95.7 | 95.7 | 95.7 | 94.2 |
The numbers in the upper right triangle are the percentage of similarity for the sequenced 803-bp fragment, and those in the lower left triangle represent the percentage of similarity for the 69-bp sequences flanked by the two Enterococcus-specific PCR primers. The similarity scores were obtained by use of the PILEUP program of the GCG software package.