Table 3. Comparative detection of DNA extracted from naive human stool spiked with S. japonicum eggs.
1 egga = 20 EPG Mean Cq [Range] |
3 eggsa = 60 EPG Mean Cq [Range] |
10 eggsa = 200 EPG Mean Cq [Range] |
|
---|---|---|---|
SjTR1 | 16.68 [15.93–17.19] | 15.58 [14.89–15.99] | 14.06 [13.60–14.34] |
mitochondrial NADH dehydrogenase I gene [17] | 29.38 [28.94–30.00] | 28.36 [26.73–29.46] | 26.30 [25.71–26.73] |
putative DNA photo-lyase gene [18] | 34.54 [33.38–35.96] | 33.35 [32.36–33.88] | 31.80 [31.31–32.25]] |
mitochondrial 16S rRNA gene [19] | 28.77 [28.44–29.17] | 27.85 [26.42–28.95] | 25.81[25.32–26.19] |
a Number of eggs spiked in a sample containing 0.05 g of stool.
Each concentration of eggs was tested using three biological replicates, and each replicate was analyzed by the SjTR1 assay in triplicate. The reported mean Cq value was calculated as a mean value of all component sample means. The reported range includes the smallest and greatest individual Cq values for each egg concentration. EPG = eggs per gram of stool.