Table 3:
Gene | Chr |
p-value Dutch Cohort |
FWER Dutch Cohort |
p-value USA Cohort | p-value Fisher’s method |
Direction | |
---|---|---|---|---|---|---|---|
PTSD Youth vs. NTC Youth | TNXB | 6 | < 0.001 | 0.030 | 0.00033 | 0.02334** | PTSD > NTC |
PM20D1 | 1 | < 0.001 | 0.040 | 6.58E-05 | 0.01104** | NTC > PTSD | |
TNXB | 6 | < 0.001 | 0.100 | 0.00169 | 0.0992 | PTSD > NTC | |
DUSP22 | 6 | < 0.001 | 0.320 | 0.00119 | 0.13888 | NTC > PTSD | |
GDF7 | 2 | 0.002 | 0.958 | 0.00119 | 0.415772 | NTC > PTSD | |
SLC1A4 | 2 | 0.004 | 0.990 | 0.00550 | 0.99 | NTC > PTSD | |
KLHL35 | 11 | 0.004 | 0.998 | 0.00018 | 0.596804 | PTSD > NTC | |
ZNF714 | 19 | 0.009 | 1 | 0.00206 | 0.996 | NTC > PTSD | |
OLFM3 | 1 | 0.016 | 1 | 0.02906 | 1 | PTSD > NTC |
Detected DMRs (L>2) using minfi’s “bumphunter” function; comparison based on the top 1000 hits in both cohorts. All findings met threshold of a combined FWER calculated with Fisher’s method of < 0.05.
indicates a significant result in both cohorts. DMR = Differently methylated regions, Chr = Chromosome; PTSD = Post-Traumatic Stress Disorder; NTC = Non-Traumatized Control; FWER = Family-Wise Error Rate.