Table 1.

Overview of existing human intestinal organoid biobanks.

Organ of origin	Disease	Number of lines	Molecular/phenotypic profiling analysis	Academic/ Commercial	References
Colorectum	Colorectal carcinoma	22	Whole-exome sequencing, gene expression	Academic	28
Colorectum	Colorectal carcinoma	55	Whole-exome sequencing, gene expression, immunohistochemistry	Academic	29
Pancreas	Pancreatic ductal adenocarcinomas	39	Whole-exome sequencing, methylation, gene expression, immunohistochemistry and in situ hybridization	Academic	33
Pancreas	Pancreatic ductal adenocarcinomas	114	Whole-genome sequencing, whole-exome sequencing, gene expression	Academic	34
Colorectum and esophagus	Colorectal and gastroesophageal cancer	Not specified	Whole-genome sequencing, gene expression, immunohistochemistry, CISH, and FISH	Academic	9
Stomach	Gastric cancer	63	Whole-genome sequencing, gene expression, CISH, gene set enrichment analysis	Academic	35
Intestine	Cystic fibrosis	664	Whole-genome sequencing	Academic	36
Pancreas	Pancreatic cancer	30	Whole-genome sequencing, gene expression, immunohistochemistry	Academic	37
Stomach	Gastric cancer	20	Whole-genome sequencing, gene expression	Academic	38
Intestine, lungs, colorectum, head, neck, liver, ovary	Normal, cancer, genetic diseases	>1000	Not specified	Commercial	https://huborganoids.nl/
Intestine, brain, lungs, muscle, breast, kidney, skin	Cancer	Not specified	Not specified	Commercial	www.attc.org
Colorectum	Cancer	Not specified	Whole-genome sequencing	Commercial	(https://cellesce.com)
Intestine	iPSC-derived intestinal organoids	Not specified	Gene expression	Commercial	https://www.definigen.com/products/intestinal/organoid/
Retina, gut, brain, pancreas, Inner ear, liver	Stem cells derived organoids	Not specified	Not specified	Commercial	https://sunbioscience.ch/
Colon	iPSC-derived colon organoids	Not specified	Gene expression analysis of colon markers, genotyping by STR analysis	Commercial	https://www.sigmaaldrich.com/