TABLE 1.
Isolate | % Identity | Group by:
|
|||||
---|---|---|---|---|---|---|---|
Phenotype
|
Antibiogramsc | Genotype
|
|||||
API | BIOLOG | APIa | BIOLOGb | TGGEa | BOX-PCRd | ||
c1 | 99.9 | 0.881 | I | I | VI | I | V |
c2 | 99.8 | 0.948 | II | III | VI | I | III |
c3 | 99.9 | 0.715 | I | III | VI | I | V |
c4 | 99.9 | 0.945 | I | III | V | I | III |
c5 | 99.2 | 0.900 | IV | IV | VI | I | IV |
c6 | 99.9 | 0.918 | I | III | VI | I | I |
c7 | 99.9 | 0.798 | I | III | V | I | IV |
c8 | 99.9 | 0.827 | I | III | VI | I | IV |
c9 | 99.9 | 0.880 | I | III | V | II | I |
c10 | 99.9 | 0.871 | I | III | VI | III | IV |
c11 | 98.6 | 0.804 | VI | III | V | V | V |
c12 | 98.6 | 0.906 | VI | I | V | I | IV |
c13 | 99.9 | 1.000 | I | I | V | I | V |
c14 | 99.9 | 0.911 | I | III | VI | I | III |
c15 | 99.9 | 0.978 | I | III | V | I | II |
c16 | 99.9 | 0.731 | I | III | VI | I | III |
c17 | 99.2 | 0.807 | IV | III | V | I | III |
c18 | 99.9 | 0.875 | I | III | V | I | III |
c19 | 99.9 | 0.884 | I | III | IV | I | II |
c20 | 99.9 | 0.901 | I | I | IV | I | III |
e1 | 99.9 | 0.762 | I | IV | VI | I | III |
e2 | 99.9 | 0.821 | I | V | III | I | III |
e3 | 99.9 | 0.765 | I | III | III | I | I |
e4 | 99.9 | 0.869 | I | I | VI | I | II |
e5 | 99.9 | 0.915 | I | I | V | I | II |
e6 | 99.2 | 0.836 | IV | I | II | II | I |
e7 | 99.9 | 0.798 | I | III | I | II | II |
e8 | 99.2 | 0.823 | IV | III | VI | I | III |
e9 | 99.2 | 0.807 | IV | I | I | II | IV |
e10 | 99.4 | 0.752 | III | III | III | I | III |
e11 | 97.7 | 0.946 | VII | III | V | III | II |
e12 | 99.9 | 0.853 | I | I | V | I | I |
e13 | 99.0 | 0.836 | V | II | III | I | III |
e14 | 99.4 | 0.928 | III | III | VI | IV | I |
e15 | 99.9 | 0.835 | I | III | VI | IV | V |
e16 | 99.9 | 0.836 | I | VI | I | I | III |
e17 | 99.9 | 0.836 | I | III | I | II | V |
e18 | 99.8 | 0.904 | II | III | VI | I | I |
e19 | 99.9 | 0.895 | I | I | VI | V | II |
t20 | 99.9 | 0.720 | I | I | III | I | I |
Grouping on the basis of 100% similarity according to cluster analysis.
Grouping on the basis of 85% similarity according to cluster analysis.
Grouping on the basis of 42% similarity according to cluster analysis.
Grouping on the basis of 90% similarity according to cluster analysis.