Table 1.
n | h | Hd (SD) | Π (SD) | K | P | Fu’s FS | Tajima's D | SSD | Hri | |
---|---|---|---|---|---|---|---|---|---|---|
Clade B | 9 | 3 | 0.417 (0.191) | 0.00108 (0.00062) | 0.8889 | 4 | 0.134 | − 1.609* | 0.025 | 0.255 |
Clade F | 60 | 7 | 0.192 (0.068) | 0.00041 (0.00019) | 0.3333 | 10 | − 5.411** | − 2.339** | 0.001 | 0.482 |
Total | 69 | 10 | 0.381 (0.073) | 0.00322 (0.00076) | 2.640 | 20 | − 0.155 | − 1.112 | 0.021 | 0.320 |
n number of samples, h number of haplotypes, Hd haplotype diversity, π nucleotide diversity, K mean number of nucleotide differences, P variable sites, SD standard deviation, SSD sum of squared differences in mismatch analysis, Hri Harpending’s raggedness index.
*p < 0.05, significant; **p < 0.01, highly significant.