TABLE 3.
Gene sets enriched in phenotype.
| Gene set name | NES | NOM p-val | FDR q-val |
|---|---|---|---|
| High expression | |||
| KEGG_GLUTATHIONE_METABOLISM | 1.84 | 0.011 | 0.133 |
| KEGG_P53_SIGNALING_PATHWAY | 1.76 | 0.005 | 0.136 |
| KEGG_GLYCOLYSIS_GLUCONEOGENESIS | 1.74 | 0. 011 | 0.099 |
| Low expression | |||
| KEGG_SYSTEMIC_LUPUS_ERYTHEMATOSUS | −2.14 | 0.000 | 0.004 |
| KEGG_VASCULAR_SMOOTH_MUSCLE_CONTRACTION | −1.90 | 0.000 | 0.018 |
| KEGG_CYTOKINE_CYTOKINE_RECEPTOR_INTERACTION | −1.88 | 0.000 | 0.018 |
| KEGG_FOCAL_ADHESION | −1.85 | 0.000 | 0.017 |
| KEGG_CHEMOKINE_SIGNALING_PATHWAY | −1.78 | 0.000 | 0.031 |
| KEGG_LEISHMANIA_INFECTION | −1.76 | 0.010 | 0.031 |