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. 2021 Nov 8;3(4):lqab102. doi: 10.1093/nargab/lqab102

Table 2.

SCDC deconvolution results based on simulated bulk RNA-seq from SCDC GEPs on pancreatic islets reference scRNA-seq from Segerstolpe2016

Cell type Pearson correlation RMSD mAD
blood vessel endothelial cell 0.68 0.017 0.010
enteroendocrine cell 0.52 0.064 0.047
fibroblast 0.87 0.020 0.017
macrophage 0.98 0.004 0.002
pancreatic A cell 0.97 0.043 0.033
pancreatic acinar cell 0.99 0.049 0.024
pancreatic D cell 0.88 0.023 0.018
pancreatic ductal cell 0.83 0.075 0.043
PP cell 0.87 0.041 0.033
type B pancreatic cell 0.94 0.055 0.040