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. 2021 Nov 8;3(4):lqab102. doi: 10.1093/nargab/lqab102

Table 3.

SCDC deconvolution results based on simulated bulk RNA-seq from SCDC GEPs on hematopoietic reference CITE-seq data from Kotliarov2020

Cell type Pearson correlation RMSD mAD
B cells 0.98 0.009 0.007
CD4 T cells 0.79 0.075 0.062
CD8 T cells 0.90 0.021 0.016
classical monocytes 0.99 0.014 0.011
DN T cells 0.13 0.078 0.058
ILCs 0.81 0.031 0.024
mDCs 0.75 0.009 0.008
non-classical monocytes 0.81 0.009 0.007
not determined 0.56 0.033 0.026
pDCs 0.61 0.003 0.002