Table 2.
Common genes identified from different condition
| Ens_Id | chr | CpG | pvalue | padj | meth.diff | log2FoldChange | Gene | Coordinates |
|---|---|---|---|---|---|---|---|---|
| ENSSSCG00000032911 | 2 | CpG:_196 | 1.77E-11 | 1.3E-10 | -30.44324324 | -2.326426281 | TNNT3 | 989931-1317600 |
| ENSSSCG00000008446 | 3 | CpG:_73 | 6.44E-32 | 1.55E-30 | -32.17542336 | 11.10018784 | SIX2 | 95459937-95464066 |
| ENSSSCG00000007574 | 3 | CpG:_29 | 1.27E-15 | 1.28E-14 | -27.95608782 | 4.797926491 | SDK1 | 2814328-3324799 |
| ENSSSCG00000038777 | 3 | CpG:_2584 | 2.91E-19 | 3.74E-18 | 26.54798762 | -2.310975194 | C7orf50 | 648140-745331 |
| ENSSSCG00000044546 | 3 | CpG:_268 | 0.0000031 | 0.0000134 | 37.31729323 | -2.390040267 | ACTB | 4091832-4096684 |
| ENSSSCG00000000672 | 5 | CpG:_30 | 5.58E-19 | 6.99E-18 | -27.95833872 | 3.098361395 | CLSTN3 | 63572062-63610618 |
| ENSSSCG00000000978 | 5 | CpG:_25 | 1.09E-10 | 7.53E-10 | 40.16694963 | -5.798324853 | MLC1 | 571961-591823 |
| ENSSSCG00000033760 | 6 | CpG:_45 | 2.42E-23 | 3.81E-22 | -41.66461765 | 3.091738308 | LTBP4 | 48831014-48861507 |
| ENSSSCG00000030513 | 6 | CpG:_22 | 1.64E-20 | 2.23E-19 | -28.87776243 | -3.566656672 | CFAP74 | 63976011-64026767 |
| ENSSSCG00000001004 | 7 | CpG:_113 | 1.78E-79 | 1.8E-77 | -47.36842105 | -5.172667179 | SLC22A23 | 1988695-2131709 |
| ENSSSCG00000039756 | 7 | CpG:_1263 | 0.000245614 | 0.000794638 | -46.61016949 | 2.565410851 | FOXC1 | 837171-838805 |
| ENSSSCG00000000994 | 7 | CpG:_48 | 1.98E-19 | 2.56E-18 | -32.53353973 | -2.603381323 | GMDS | 752239-1285550 |
| ENSSSCG00000002490 | 7 | CpG:_322 | 7.43E-17 | 8.2E-16 | -26.30769231 | 4.557359006 | GSC | 116099047-116100966 |
| ENSSSCG00000022383 | 14 | CpG:_139 | 0.001072997 | 0.005378408 | -28.33208302 | -7.451598322 | GATA4 | 14858159-14939941 |
| ENSSSCG00000017095 | 16 | CpG:_21 | 5.42E-20 | 7.2E-19 | -29.06597882 | 3.18365959 | SEMA5A | 72492516-73329010 |
| ENSSSCG00000016703 | 18 | CpG:_55 | 3.93E-17 | 4.43E-16 | -41.8356998 | 4.687258693 | HOXA5 | 45421663-45432885 |