Table 1.
Species | Tissue | Source | ROIs | Mean pass number | Full-length PA-containing reads | High-quality readsa | |
---|---|---|---|---|---|---|---|
Count | Mean length | ||||||
Macaque | Cerebellum | Zhang et al. | 1 128 095 | 2432 | 7 | 620 944 | 443 937 |
Frontal cortex | This study | 2 769 148 | 1756 | 8 | 1 542 070 | 889 600 | |
Heart | This study | 2 558 353 | 1590 | 10 | 1 584 962 | 907 278 | |
Testis | This study | 1 528 384 | 1702 | 14 | 1 144 126 | 960 690 | |
Human | Cerebellum | Zhang et al. | 1 179 556 | 1971 | 7 | 729 586 | 446 469 |
Frontal cortex | PacBio | 691 846 | 3277 | 5 | 503 891 | 387 717 | |
Heart | PacBio | 1 667 650 | 2973 | 2 | 394 347 | 221 242 | |
Liver | PacBio | 1 789 673 | 2479 | 3 | 485 741 | 438 777 | |
Mouse | Frontal cortex | This study | 751 620 | 2086 | 16 | 470 764 | 330 869 |
aHigh-quality reads were defined as the reads not mapped to the gap regions, mapped uniquely to one locus, mapped with pass number >1 and no internal poly(A) primes detected.