Table 3.
PacBio Subread length and fragment size results
Organism | Polymerase read mean length (kb) | Number of reads | Fragment mean length (kb) | Number of subreads | Subread mean length (kb) | Subread min/max length (bp) |
---|---|---|---|---|---|---|
P. falciparum | 12.3 | 525,996 | 9.5 | 578,188 | 9.6 | 1–50,720 |
E. coli | 6.8 | 131,520 | 5.7 | 142,673 | 6.2 | 1–28,647 |
L. infantum | 17.0 | 311,471 | 11.7 | 445,620 | 10.3 | 35–64,072 |
T. thermophilus NAR1 | 16.5 | 60,929 | 11.3 | 98,247 | 10.2 | 35–62,446 |
M. hassiacum | 17.0 | 69,152 | 9.4 | 141,382 | 8.3 | 35–57,888 |
T. lapidicaptus | 14.7 | 107,224 | 4.9 | 382,405 | 4.0 | 1–69,567 |