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. 2021 Aug 4;22(6):bbab271. doi: 10.1093/bib/bbab271

Table 3.

Model prediction performance comparison results in terms of ROC-AUC and AUPR

Model Algorithm ROC-AUC AUPR
32 XGBOOST 0.883 ± 0.005 0.357 ± 0.008
33 XGBOOST 0.891 ± 0.004 0.370 ± 0.014
35 ERT 0.849 ± 0.007 0.244 ± 0.013
37 Logistic Regression 0.846 ± 0.008 0.188 ± 0.007
39 Feed-forward neural network 0.913 ± 0.005 0.396 ± 0.015
40 Feed-forward neural network 0.915 ± 0.004 0.429 ± 0.019
44 Autoencoder 0.891 ± 0.005 0.356 ± 0.018
45 End-to-end neural network 0.913 ± 0.005 0.423 ± 0.021

‘Model’ column indicates the reference number of the model in the main text. The results in ‘ROC-AUC’ and ‘AUPR’ are in the form of mean ± SD from five repeated experiments. Highlighted rows are top-performing methods.