Table 3.
List of different types of circRNA-disease prediction models
| Model name | Core algorithm | Model type | Source code |
|---|---|---|---|
| PCWCDA | DFS algorithm | Network algorithm-based model | Unavailable |
| BRWSP | Biased random walk algorithm | Network algorithm-based model | Unavailable |
| KATZHCDA | KATZ | Network algorithm-based model | Unavailable |
| KATZCPDA | KATZ | Network algorithm-based model | Unavailable |
| IBNPKATZ | Bipartite network projection algorithm and KATZ | Network algorithm-based model | Unavailable |
| NCPCDA | Network consistency projection | Network algorithm-based model | Unavailable |
| DWNCPCDA | DeepWalk and network consistency projection | Network algorithm-based model | Unavailable |
| LLCDC | LLC and label propagation algorithm | Network algorithm-based model | Unavailable |
| CD-LNLP | Label propagation algorithm | Network algorithm-based model | Unavailable |
| DWNN-RLS | Regularized least squares of kronecker product kernel | The first type of machine learning-based model | Unavailable |
| RWRLCDA | Random work and logistic regression | The first type of machine learning-based model | Unavailable |
| MRLDC | Manifold regularization-learning | The first type of machine learning-based model | Unavailable |
| iCircDA-MF | Matrix factorization | The first type of machine learning-based model | Unavailable |
| GMCDA | Graph-based multi-label learning | The first type of machine learning-based model | Unavailable |
| iCDA-CMG | Collective Matrix completion | The first type of machine learning-based model | Unavailable |
| NMFIBAC | Non-negative matrix factorization | The first type of machine learning-based model | Unavailable |
| SIMCCDA | Speedup inductive matrix completion | The first type of machine learning-based model | https://github.com/bioinformaticsAHU /SIMCCDA |
| PreCDA | PersonalRank algorithm | The first type of machine learning-based model | https://github.com/wythit/PreCDA |
| ICFCDA | Collaboration filtering | The first type of machine learning-based model | Unavailable |
| RWRKNN | Random walk with restart and KNN | The second type of machine learning-based model | Unavailable |
| iCDA-CGR | SVM | The second type of machine learning-based model | Unavailable |
| GBDTCDA | GBDT | The second type of machine learning-based model | Unavailable |
| DFPUCDA | DF | The second type of machine learning-based model | https://github.com/xzenglab/DeepDCR |
| CNNCDA | CNN | The second type of machine learning-based model | Unavailable |
| GCNCDA | Graph Convolutional Network | The second type of machine learning-based model | Unavailable |
| AE-DNN | Autoencoder and DNN | The second type of machine learning-based model | Unavailable |
| AE-RF | Autoencoder and RF | The second type of machine learning-based model | https://github.com/Deepthi-K523 /AE-RF |