TABLE 3.
List of 50 laticifer-abundant expressed small nucleolar RNA (snoRNA) candidates in Hevea brasiliensis.
Name | Original ID | Length | Class | Predicted using | RealFC |
HbsnoR1 | comp134121_c0_seq4 | 71 | C/D guide | snoScan | 5273.50 |
HbsnoR2 | comp135067_c1_seq25 | 91 | C/D guide | snoScan | 5142.20 |
HbsnoR3 | comp133339_c1_seq1 | 80 | C/D guide | snoScan | 5110.30 |
HbsnoR4 | comp127218_c0_seq2 | 112 | C/D guide | snoScan | 4702.82 |
HbsnoR5 | comp134112_c0_seq38 | 106 | C/D guide | snoScan | 4036.87 |
HbsnoR6 | comp138449_c0_seq9 | 98 | C/D guide | snoScan | 3803.49 |
HbsnoR7 | comp136167_c0_seq2 | 85 | C/D guide | snoScan | 3440.23 |
HbsnoR8 | comp127540_c0_seq7 | 114 | C/D guide | snoScan | 311.90 |
HbsnoR9 | comp136053_c0_seq5 | 79 | C/D guide | snoScan | 98.57 |
HbsnoR10 | comp112986_c0_seq1 | 105 | C/D guide | snoScan | 53.87 |
HbsnoR11 | comp136053_c0_seq1 | 79 | C/D guide | snoScan | 44.37 |
HbsnoR12 | comp55259_c0_seq1 | 90 | C/D guide | snoScan | 6.50 |
HbsnoR13 | comp132131_c0_seq2 | 109 | C/D guide | snoScan | 5.73 |
HbsnoR14 | comp125573_c0_seq3 | 129 | C/D guide | snoScan | 5.12 |
HbsnoR15 | comp136113_c0_seq10 | 114 | C/D guide | snoScan | 4.51 |
HbsnoR16 | comp132232_c0_seq2 | 158 | C/D guide | snoScan | 4.05 |
HbsnoR17 | comp132541_c0_seq6 | 76 | C/D guide | snoScan | 3.57 |
HbsnoR18 | comp131062_c0_seq3 | 103 | C/D guide | snoScan | 3.56 |
HbsnoR19 | comp135337_c0_seq2 | 85 | C/D guide | snoScan | 3.04 |
HbsnoR20 | comp130910_c0_seq1 | 70 | C/D guide | CDSeeker | 2.85 |
HbsnoR21 | comp138599_c0_seq5 | 143 | C/D guide | CDSeeker | 2.84 |
HbsnoR22 | comp123171_c0_seq1 | 130 | orphan | CDSeeker | 4.93 |
HbsnoR23 | comp127086_c0_seq5 | 129 | H/ACA guide | ACASeeker | 12485.31 |
HbsnoR24 | comp138286_c0_seq14 | 157 | orphan | ACASeeker | 14668.81 |
HbsnoR25 | comp83639R_c0_seq3 | 145 | orphan | ACASeeker | 8562.99 |
HbsnoR26 | comp125664_c0_seq1 | 161 | orphan | ACASeeker | 5303.07 |
HbsnoR27 | comp86093_c0_seq1 | 122 | orphan | ACASeeker | 4788.97 |
HbsnoR28 | comp117226_c0_seq1 | 137 | orphan | ACASeeker | 4759.08 |
HbsnoR29 | comp133438_c0_seq17 | 145 | orphan | ACASeeker | 4527.53 |
HbsnoR30 | comp135975_c0_seq12 | 131 | orphan | ACASeeker | 3567.82 |
HbsnoR31 | comp89929_c0_seq2 | 142 | orphan | ACASeeker | 2788.92 |
HbsnoR32 | comp136348_c1_seq1 | 124 | orphan | ACASeeker | 353.33 |
HbsnoR33 | comp132848_c0_seq1 | 138 | orphan | ACASeeker | 226.49 |
HbsnoR34 | comp113290_c0_seq3 | 121 | orphan | ACASeeker | 77.61 |
HbsnoR35 | comp129581_c0_seq2 | 147 | orphan | ACASeeker | 60.00 |
HbsnoR36 | comp132931_c0_seq2 | 122 | orphan | ACASeeker | 22.58 |
HbsnoR37 | comp129581_c0_seq3 | 147 | orphan | ACASeeker | 17.36 |
HbsnoR38 | comp115823_c0_seq1 | 125 | orphan | ACASeeker | 12.87 |
HbsnoR39 | comp141150_c0_seq1 | 142 | orphan | ACASeeker | 10.58 |
HbsnoR40 | comp137921_c0_seq3 | 143 | orphan | ACASeeker | 9.69 |
HbsnoR41 | comp136512_c0_seq1 | 157 | orphan | ACASeeker | 8.06 |
HbsnoR42 | comp136486_c0_seq1 | 141 | orphan | ACASeeker | 6.90 |
HbsnoR43 | comp134776_c0_seq2 | 140 | orphan | ACASeeker | 5.84 |
HbsnoR44 | comp137994_c0_seq3 | 135 | orphan | ACASeeker | 5.14 |
HbsnoR45 | comp135572_c0_seq1 | 143 | orphan | ACASeeker | 4.97 |
HbsnoR46 | comp137742_c0_seq1 | 149 | guide | ACASeeker | 4.44 |
HbsnoR47 | comp131146_c0_seq2 | 152 | orphan | ACASeeker | 3.45 |
HbsnoR48 | comp134726_c0_seq6 | 139 | orphan | ACASeeker | 3.44 |
HbsnoR49 | comp135184_c1_seq2 | 156 | orphan | ACASeeker | 3.26 |
HbsnoR50 | comp136849_c0_seq1 | 144 | orphan | ACASeeker | 2.41 |