Table 3.
List of synonymous and non-synonymous SNP variants identified in the candidate genes of BnaA02g33090D, BnaA10g09290D and BnaC08g26640D
| Gene | SNP | Major allele |
Minor allele |
SNP location | SNP type | Amino acid changes |
|---|---|---|---|---|---|---|
| BnaA02g33090D | chrA02_23899623 | G | A | Intron | – | – |
| chrA02_23899654 | G | T | Intron | – | – | |
| chrA02_23899669 | T | A | Intron | – | – | |
| chrA02_23899686 | C | T | Exon | Synonymous | – | |
| chrA02_23899688 | A | C | Exon | Non-synonymous | Histidine to proline | |
| BnaA10g09290D | chrA10_8216680 | T | A | Exon | Non-synonymous | Isoleucine to asparagine |
| chrA10_8216711 | C | T | Intron | – | ||
| chrA10_8216756 | A | T | Exon | Synonymous | ||
| BnaC08g26640D | chrC08_27999709 | A | T | Intron | – | – |
| chrC08_27999778 | A | T | Exon | Non-synonymous | Isoleucine to asparagine | |
| chrC08_27999846 | T | C | Exon | Synonymous | – |