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. 2021 Nov 10;9(3):e00913-21. doi: 10.1128/Spectrum.00913-21

TABLE 1.

Performance of VREfm prediction models in terms of k-fold CV, timewise validation, and external validation

Evaluation metrics Machine learning models:
RF model SVM model KNN model
AUROC (95% CI)
 5-fold CV 0.8495 (0.8397–0.8594) 0.8367 (0.8264–0.8471) 0.7908 (0.7792–0.8024)
 10-fold CV 0.8491 (0.8392–0.8589) 0.8338 (0.8234–0.8442) 0.7589 (0.7468–0.7710)
 Timewise validation 0.8463 (0.8273–0.8654) 0.8368 (0.8169–0.8566) 0.7908 (0.7690–0.8127)
 External validation 0.8553 (0.8399–0.8706) 0.8407 (0.8246–0.8569) 0.8050 (0.7872–0.8227)
Accuracy (95% CI)
 5-fold CV 0.7769 (0.7660–0.7878) 0.7610 (0.7499–0.7721) 0.7248 (0.7131–0.7364)
 10-fold CV 0.7789 (0.7608–0.7827) 0.7587 (0.7476–0.7699) 0.6906 (0.6786–0.7027)
 Timewise validation 0.7840 (0.7640–0.8039) 0.7815 (0.7615–0.8016) 0.7228 (0.7011–0.7445)
 External validation 0.7855 (0.7687–0.8024) 0.7781 (0.7610–0.7951) 0.7355 (0.7174–0.7536)
Sensitivity (95% CI)
 5-fold CV 0.8054 (0.7951–0.8517) 0.7826 (0.7719–0.7934) 0.7873 (0.7767–0.7980)
 10-fold CV 0.7863 (0.7756–0.7969) 0.8192 (0.8091–0.8292) 0.7096 (0.6978–0.7214)
 Timewise validation 0.8153 (0.7965–0.8341) 0.8415 (0.8238–0.8592) 0.7491 (0.7281–0.7702)
 External validation 0.7791 (0.7620–0.7961) 0.7954 (0.7789–0.8120) 0.8044 (0.7881–0.8207)
Specificity (95% CI)
 5-fold CV 0.7497 (0.7384–0.7609) 0.7403 (0.7289–0.7517) 0.6649 (0.6526–0.6772)
 10-fold CV 0.7789 (0.7680–0.7897) 0.7009 (0.6890–0.7128) 0.6725 (0.6603–0.6848)
 Timewise validation 0.7477 (0.7266–0.7688) 0.7120 (0.6900–0.7340) 0.6922 (0.6698–0.7146)
 External validation 0.7930 (0.7764–0.8096) 0.7580 (0.7405–0.7756) 0.6560 (0.6365–0.6755)