Table 4.
Forward selection ANOVA generalized linear model on factors associated with the vaginal microbiome stability metrics.
| A. stability | |||||
| Average BC distances | Type of variable | Df | Deviance | Pr(>Chi) | Variation Explained (%) |
|---|---|---|---|---|---|
| Cohort | constant | 1 | 2.2243 | 0.02929 | 8.77 |
| Sexual_Interc. | longitudinal | 1 | 2.0644 | 0.05949 | 6.55 |
| Race | constant | 3 | 1.9185 | 0.35597 | 5.98 |
| Antibiotics.4W | one-time event (TO) | 1 | 1.8722 | 0.31085 | 1.84 |
| HRT. | longitudinal | 1 | 1.7631 | 0.33485 | 1.71 |
| Antibiotics. | longitudinal | 1 | 1.7426 | 0.49951 | 0.84 |
| BMI | constant | 1 | 1.7273 | 0.56041 | 0.62 |
| Age | constant | 1 | 1.7111 | 0.548 | 0.66 |
| Residuals | constant | 38 | 73.03 | ||
| B. Resistance | |||||
| BC TO-T1 | Type of variable | Df | Deviance | Pr(>Chi) | Variation Explained (%) |
| SexuaI_Interc. | longitudinal | 1 | 3.9387 | 0.08597 | 5.55 |
| Cohort | constant | 1 | 3.8318 | 0.24309 | 2.56 |
| Race | constant | 2 | 3.5701 | 0.34451 | 4.01 |
| Antibiotics.4W | one-time event (T1) | 1 | 3.178 | 0.06049 | 6.6 |
| Age | constant | 1 | 3.1172 | 0.37862 | 1.4 |
| HRT.4W | one-time event (T1) | 1 | 3.0716 | 0.44598 | 1.09 |
| BMI | constant | 1 | 3.062 | 0.72626 | 0.2 |
| Residuals | 21.41 | ||||
| C. Resilience | |||||
| BC TO-T3 | Type of variable | Df | Deviance | Pr(>Chi) | Variation Explained (%) |
| HRT. | longitudinal | 1 | 2.962 | 0.04758 | 8.61 |
| Sexual_Interc. | longitudinal | 1 | 2.79 | 0.12001 | 5.3 |
| Age | constant | 1 | 2.614 | 0.11572 | 5.43 |
| Antibiotics. | longitudinal | 1 | 2.5602 | 0.38447 | 1.65 |
| Cohort | constant | 1 | 2.5144 | 0.42237 | 1.41 |
| Race | constant | 3 | 2.3301 | 0.45901 | 5.68 |
| Antibiotics.4W | one-time event (TO) | 1 | 2.2762 | 0.78661 | 0.16 |
| BMI | constant | 1 | 2.2762 | 0.9812 | 0 |
| Residuals | 71.76 | ||||