TABLE 1.
PMR value of candidate genes in tissue and serum samples of patients with epithelial ovarian carcinoma and healthy control group. PMR: percentage of methylated reference. p-value: Mann-Whitney U two-tailed tests. aThe PMR value of HOXA9 and HIC1 gene in tissue and serum samples of patients with epithelial ovarian carcinoma and healthy control group has been previously described (Singh et al., 2020).
Gene | Parameter | No. of patients | Mean ± Std.Error | Min | Max | 25th | 50th | 75th | p-value |
---|---|---|---|---|---|---|---|---|---|
HOXA9a | Tissue PMR | ||||||||
Tumor | 85 | 32.83 ± 3.02 | 0.29 | 97.54 | 8.78 | 24.72 | 49.34 | <0.0001*** | |
Healthy | 35 | 2.72 ± 0.31 | 0.14 | 6.68 | 1.32 | 2.53 | 3.8 | ||
Serum PMR | |||||||||
Tumor | 45 | 13.2 ± 2.52 | 0.05 | 87.42 | 1.97 | 7.45 | 18.95 | <0.0001*** | |
Healthy | 25 | 1.45 ± 0.21 | 0.18 | 3.57 | 0.46 | 1.35 | 2.30 | ||
HIC1a | Tissue PMR | ||||||||
Tumor | 85 | 28.54 ± 2.72 | 0.14 | 88.82 | 8.07 | 22.05 | 45.98 | <0.0001*** | |
Healthy | 35 | 3.47 ± 0.39 | 0.13 | 10.65 | 1.97 | 3.33 | 3.93 | ||
Serum PMR | |||||||||
Tumor | 45 | 12.98 ± 2.21 | 0.06 | 58.68 | 3.28 | 7.96 | 14.91 | <0.0001*** | |
Healthy | 25 | 1.67 ± 0.26 | 0.06 | 3.79 | 0.35 | 1.58 | 2.78 | ||
SOX1 | Tissue PMR | ||||||||
Tumor | 85 | 33.24 ± 3.35 | 0.45 | 96.53 | 5.17 | 19.64 | 60.53 | <0.0001*** | |
Healthy | 35 | 2.76 ± 0.29 | 0.74 | 6.52 | 1.46 | 2.14 | 3.81 | ||
Serum PMR | |||||||||
Tumor | 45 | 16.09 ± 3.25 | 0.19 | 80.61 | 2.14 | 4.60 | 28.04 | <0.0001*** | |
Healthy | 25 | 1.84 ± 0.24 | 0.22 | 4.15 | 0.61 | 1.73 | 2.72 | ||
RASSF1A | Tissue PMR | ||||||||
Tumor | 85 | 30.97 ± 3.46 | 0.49 | 98.42 | 3.60 | 15.10 | 58.28 | <0.0001*** | |
Healthy | 35 | 3.24 ± 0.31 | 0.59 | 8.09 | 2.10 | 2.97 | 4.20 | ||
DAPK1 | Tissue PMR | ||||||||
Tumor | 85 | 30.82 ± 3.24 | 0.51 | 94.87 | 3.13 | 27.19 | 55.9 | <0.0001*** | |
Healthy | 35 | 3.11 ± 0.41 | 0.33 | 11.18 | 1.48 | 2.24 | 4.67 | ||
SFRP1 | Tissue PMR | ||||||||
Tumor | 85 | 24.71 ± 2.94 | 0.34 | 96.53 | 3.93 | 10.09 | 40.62 | <0.0001*** | |
Healthy | 35 | 3.30 ± 0.32 | 0.87 | 8.72 | 1.78 | 3.17 | 4.19 | ||
SPARC | Tissue PMR | ||||||||
Tumor | 85 | 25.55 ± 3.36 | 0.03 | 99.38 | 2.36 | 10.43 | 44.66 | <0.0001*** | |
Healthy | 35 | 3.39 ± 0.42 | 0.05 | 8.77 | 1.40 | 3.12 | 5.59 |