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. 2021 Nov 4;29(11):1312–1325.e3. doi: 10.1016/j.str.2021.06.015

Table 2.

Anionic lipid binding sites in 9-copy simulations

Binding sitea
TM1_H8
ICL1_TM4
TM3_TM4_ICL2
TM3_TM5
TM5_TM6_ICL3
TM6_TM7
A2aR stateb I A AmG I A AmG I A AmG I A AmG I A AmG I A AmG
PIP2binding sites in PIP2-containing simulations

Residence time (μs) 1.4 1.6 20.2 0.6 1.0 21.3 0.5 0.5 27.1 1.5 3.2 20.4 0.8 4.9 8.1 2.4 12.1 31.3
No. of PIP2 molecules 4.4 2.9 5.4 2.7 2.1 3.1 3.0 3.0 3.3 3.8 3.6 5.1 4.2 5.6 5.1 3.9 4.1 3.4

DOPS binding sites in PIP2-free simulations

Residence time (μs) 0.2 0.7 1.7 0.2 0.17 1.2 0.2 0.2 3.5 0.06 0.09 2.9 0.2 0.2 2.4 0.2 0.5 3.0
No. of DOPS molecules 1.6 1.6 1.6 1.3 1.4 1.6 1.6 1.6 1.7 1.5 1.5 1.6 1.6 1.6 1.4 1.4 1.8 1.7
a

The binding sites are illustrated in Figure 6B, to which the color coding used above corresponds. Binding sites were calculated based on the interactions of head group beads.

b

I, inactive; A, active; AmG, active + mini Gs.