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. 2021 Nov 3;2(4):100932. doi: 10.1016/j.xpro.2021.100932
REAGENT or RESOURCE SOURCE IDENTIFIER
Antibodies

Mouse anti-Tubulin β3 (Tuj1) (1:250) Biolegend Cat# ab801202;
RRID: AB_10063408
Alexa Fluor® 488 AffiniPure Donkey Anti-Mouse IgG (H+L) (1:500) Jackson ImmunoResearch Labs Cat# 715-545-151; RRID:AB_2341099
Alexa Fluor® 594 AffiniPure Donkey Anti-Mouse IgG (H+L) (1:500) Jackson ImmunoResearch Labs Cat# 715-585-151; RRID:AB_2340855

Chemicals, peptides, and recombinant proteins

DMEM Fisher Scientific Cat# 11995-040
DPBS Fisher Scientific Cat# 14190144
NaCl (5 M) Fisher Scientific Cat# 24740011
Tris-HCl (1 M, pH 8.0) Fisher Scientific Cat# 15568025
Ketamine Vedco Inc. Cat# NDC 50989
Xylazine Akorn Inc. Cat# NDC 59399
FBS Fisher Scientific Cat# MT35010CV
Penicillin-streptomycin Fisher Scientific Cat# BW17602E
Polyethylenimine (PEI) Polysciences Cat# 23966-1
Benzonase Sigma Cat# E1014_25kU
Iodixanol Fisher Scientific Cat# NC1059560
Fast Green Fisher Scientific Cat# S25692
Mineral oil Fisher Scientific Cat# BP26291
N-Methyl-D-aspartic Acid (NMDA) Millipore Sigma Cat# 454575
Fluoromount-G Slide Mounting Medium Fisher Scientific Cat# OB100-01

Experimental models: Cell lines

AAVpro 293T Cell Line Takara Bio Cat# 632273

Experimental models: Organisms/strains

Mouse: C57BL/6J (8-week-old, male or female) The Jackson Laboratory Cat# JAX:000664, RRID: IMSR_JAX:000664

Recombinant DNA

pAAV-GFP Obtained from Dr. Kevin Park N/A
pAAV-EBFP Guo et al. (2021) N/A
pAAV-CaMKIIα T286D Guo et al. (2021) N/A
pRep-Cap Addgene Cat# 104963
pHelper Addgene Cat# 112867

Software and algorithms

GraphPad Prism 9 GraphPad https://www.graphpad.com/scientific-software/prism/
ImageJ Schindelin et al. (2012) https://imagej.net/Fiji

Other

Confocal microscope Zeiss LSM 800
Stereomicroscope Leica M60
Motorized microscope stand Promicra Promicra PRO-MLS
Beam splitter Leica Wild 319449
Microscope camera HAYEAR HY-3307
Camera adaptor Leica Leica 10445319
Observation tube Leica-Wild Wild 411576
Observation tube adaptor Leica Wild 10411576
Micropipette puller Sutter Instruments Model P-1000
Ultracentrifuge Beckman Optima L-90K
Rotor Beckman VTi 50
Syringe Hamilton Cat# 80965
Bulldog clamp Fine Scientific Tools Cat# 18051-28
Mouse head holder KOPF Model 921-E
Dumont #55 Forceps Fine Science Tools Cat# 11255-20
Dumont #5 Fine Forceps Fine Science Tools Cat# 11254-20
Dumont #5 Fine Forceps, only for optic nerve crush Fine Science Tools Cat# 11254-20
Scissors Crimson International Eye instruments Cat# 6004A-105
Heating pad ConductScience Cat# RWD-800-00179-00
OptiSeal centrifuge tube Beckman Cat# 362183
15 mL Amicon centrifugal filters Fisher Scientific Cat# UFC901024
0.5 mL Amicon centrifugal filters Fisher Scientific Cat# UFC501024
PE tubing Warner Instruments Cat# 64-0752
Glass capillaries Sutter Instrument Cat# BF150-75-10
Underpads Fisher Scientific Cat# 22-037-950
Slides Fisher Scientific Cat# 22-034979
Cover glass Fisher Scientific Cat# 12-542A