Table 1.
Sl no | Up-regulated (fold change ≥1.5) | Down-regulated (fold change ≤0.66) | ||||
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Gene Symbol | Description | Fold change | Gene Symbol | Description | Fold change | |
1 | Car2 | carbonic anhydrase 2 isoform X1 | 7.813 | Mt2 | metallothionein-2 | 0.266 |
2 | Hbb-bt | hemoglobin, beta adult t chain | 6.061 | Ccdc126 | coiled-coil domain-containing protein 126 isoform 1 precursor | 0.276 |
3 | Pvalb | parvalbumin alpha isoform X1 | 4.565 | Mt1 | metallothionein-1 | 0.286 |
4 | Hba-a2 | hemoglobin alpha, adult chain 2 | 4.242 | Yaf2 | YY1-associated factor 2 isoform X1 | 0.334 |
5 | Scrn3 | secernin-3 isoform X1 | 3.952 | Tfeb | transcription factor EB isoform a | 0.355 |
6 | Slc4a1 | band 3 anion transport protein | 3.933 | Serpina1e | alpha-1-antitrypsin 1-5 precursor | 0.361 |
7 | Fga | fibrinogen alpha chain isoform 1 preproprotein | 3.582 | Hist2h2aa2 | histone H2A type 2-A | 0.477 |
8 | Fgg | fibrinogen gamma chain isoform 2 precursor | 3.427 | Hacd2 | 3-Hydroxyacyl-CoA Dehydratase 2 | 0.477 |
9 | Fgb | fibrinogen beta chain preproprotein | 3.360 | Hspb1 | heat shock protein beta-1 | 0.485 |
10 | Tnnc2 | troponin C, skeletal muscle | 3.155 | Hmga1 | high mobility group protein HMG-I/HMG-Y isoform a | 0.527 |
The data shown in the table are the altered proteins in the LDN193189 treated as compared to the untreated controls. The data obtained for LC-MS/MS were analyzed using Proteome discoverer 2.1, which compares the LC-MS/MS data against mouse database. This table shows 10 proteins with highest fold increase and 10 proteins which are most down-regulated, their gene symbol, and their fold change, i.e., concentration in LDN193189 treated melanoma/concentration in untreated melanoma.