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. 2021 Oct 15;13(10):11081–11093.

Table 1.

Genes and the fold change of proteins altered in the LDN193189 treated melanoma tissue

Sl no Up-regulated (fold change ≥1.5) Down-regulated (fold change ≤0.66)


Gene Symbol Description Fold change Gene Symbol Description Fold change
1 Car2 carbonic anhydrase 2 isoform X1 7.813 Mt2 metallothionein-2 0.266
2 Hbb-bt hemoglobin, beta adult t chain 6.061 Ccdc126 coiled-coil domain-containing protein 126 isoform 1 precursor 0.276
3 Pvalb parvalbumin alpha isoform X1 4.565 Mt1 metallothionein-1 0.286
4 Hba-a2 hemoglobin alpha, adult chain 2 4.242 Yaf2 YY1-associated factor 2 isoform X1 0.334
5 Scrn3 secernin-3 isoform X1 3.952 Tfeb transcription factor EB isoform a 0.355
6 Slc4a1 band 3 anion transport protein 3.933 Serpina1e alpha-1-antitrypsin 1-5 precursor 0.361
7 Fga fibrinogen alpha chain isoform 1 preproprotein 3.582 Hist2h2aa2 histone H2A type 2-A 0.477
8 Fgg fibrinogen gamma chain isoform 2 precursor 3.427 Hacd2 3-Hydroxyacyl-CoA Dehydratase 2 0.477
9 Fgb fibrinogen beta chain preproprotein 3.360 Hspb1 heat shock protein beta-1 0.485
10 Tnnc2 troponin C, skeletal muscle 3.155 Hmga1 high mobility group protein HMG-I/HMG-Y isoform a 0.527

The data shown in the table are the altered proteins in the LDN193189 treated as compared to the untreated controls. The data obtained for LC-MS/MS were analyzed using Proteome discoverer 2.1, which compares the LC-MS/MS data against mouse database. This table shows 10 proteins with highest fold increase and 10 proteins which are most down-regulated, their gene symbol, and their fold change, i.e., concentration in LDN193189 treated melanoma/concentration in untreated melanoma.